[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39241.1
DDBJ      :             PgPepO oligopeptidase. Metallo peptidase. MEROPS family M13
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  248/915 : Eukaryota  118/199 : Viruses  1/175   --->[See Alignment]
d.92.1
:678 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->675 3dwbA PDBj 3e-82 33.2 %
:RPS:PDB   39->678 3dwbA PDBj e-123 31.9 %
:RPS:SCOP  39->678 1dmtA  d.92.1.4 * e-151 29.4 %
:HMM:SCOP  21->678 1dmtA_ d.92.1.4 * 1.2e-189 36.5 %
:RPS:PFM   47->419 PF05649 * Peptidase_M13_N 4e-53 35.2 %
:RPS:PFM   472->667 PF01431 * Peptidase_M13 2e-60 54.1 %
:HMM:PFM   47->419 PF05649 * Peptidase_M13_N 3.9e-97 33.8 370/388  
:HMM:PFM   471->675 PF01431 * Peptidase_M13 1.4e-60 42.3 201/202  
:BLT:SWISS 38->675 ECE1_HUMAN 5e-81 33.2 %
:PROS 509->518|PS00142|ZINC_PROTEASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39241.1 GT:GENE ABE39241.1 GT:PRODUCT PgPepO oligopeptidase. Metallo peptidase. MEROPS family M13 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2243897..2245933) GB:FROM 2243897 GB:TO 2245933 GB:DIRECTION - GB:PRODUCT PgPepO oligopeptidase. Metallo peptidase. MEROPS family M13 GB:PROTEIN_ID ABE39241.1 GB:DB_XREF GI:91682939 InterPro:IPR000718 InterPro:IPR006025 InterPro:IPR008753 LENGTH 678 SQ:AASEQ MRRLAFMLLVISPIVTLTAPARAGDKPVLGNWGIETQTISATVRPGDDFYRYVNEGWLKTAAPPPGMAYANSFVDAYQRTQGQLQKLIDGILVSTPAPGSDEAKIAALYRSYIDVAGRNQRGLSPIKSDLDSIWAIRTHEDAARLQGQPFFKSPIDIGVVTDDKKPERYVIGAMQAGLGLPSREYYLTAGEPFDGHRAAYLAYVADIFKRVGVADGGDRAKAILAFETRLAEAQWTAAEQRDPVKSYRLLSIAELQAYAPAFPWQIYLEAAGFSRPTELVLTTDTAIQKSAEIFKATDIETIKSYLAFHLVDDFAPNLTEELDRASFAFNSTRLHGVPEQEALEKRAQTFVTSTFGEIFGRAYAKAYFPENYRAKMDRMITNIRAAFHKRLDANPWMDEATRKAAIVKLEAIVKHVGYPDRWRDWSSVAFDPTDLVGNRRKAEAFARADAIAKLGEKRREWQWSYPATDINAGYSPQMNSITFPAGILQPPFFDPNADDAVNYGAIGAVIGHELGHAFDDQGSQSDATGALRNWWTDVSRAEFSKRTAVLVQQFSGYSPLPGMRVNGELTLGENIGDLGGITIAHEAYRMLVDQEHGGKAPVIDGFTGDQRFFLSWAQVWRDFTTPDQARQNLLSDAHSPSEFRVNGALRNLDAWYAAFGVKDGDKLYLPQDSRVRIW GT:EXON 1|1-678:0| BL:SWS:NREP 1 BL:SWS:REP 38->675|ECE1_HUMAN|5e-81|33.2|627/770| PROS 509->518|PS00142|ZINC_PROTEASE|PDOC00129| BL:PDB:NREP 1 BL:PDB:REP 38->675|3dwbA|3e-82|33.2|620/660| RP:PDB:NREP 1 RP:PDB:REP 39->678|3dwbA|e-123|31.9|623/660| RP:PFM:NREP 2 RP:PFM:REP 47->419|PF05649|4e-53|35.2|369/386|Peptidase_M13_N| RP:PFM:REP 472->667|PF01431|2e-60|54.1|196/205|Peptidase_M13| HM:PFM:NREP 2 HM:PFM:REP 47->419|PF05649|3.9e-97|33.8|370/388|Peptidase_M13_N| HM:PFM:REP 471->675|PF01431|1.4e-60|42.3|201/202|Peptidase_M13| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF05649|IPR008753| GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF05649|IPR008753| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01431|IPR018497| GO:PFM GO:0006508|"GO:proteolysis"|PF01431|IPR018497| RP:SCP:NREP 1 RP:SCP:REP 39->678|1dmtA|e-151|29.4|633/697|d.92.1.4| HM:SCP:REP 21->678|1dmtA_|1.2e-189|36.5|649/696|d.92.1.4|1/1|Metalloproteases ("zincins"), catalytic domain| OP:NHOMO 1094 OP:NHOMOORG 373 OP:PATTERN --------------------------------------------1-11--11---------1------ 3551-11111111121-11-11111111111111112111-1-11111111111111111--11-------1211111----------1121-111---11111-2-1-2---------------------------------------------------------------------------------------------------------------1--------------------------------211221133311112211111112211111111111111111111111111111111112221112221----2-------2-3----------------------------------1--13112---------------1----------------------------------------112----------11111111-111--1-------------------------------1-111---------------------------------------2----------------2--------------1-----------------------111121-----------------------------11-2--2112-2333322233322323233---------------------------------------------------------------------------------------------------1-----1111-----111---1----1------1------------------------------1------------------44565663331111-------------------------1-111-1------21--1--------------2- --------------2--1111111-11111111-------------11--12122111-------------------------------111-11111111-1634--1-D776B596666687GI7A6RrD1C8H4764A579637573C43F777666DK78EH3L56NCLJ41--17-------2-1--113433- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 641 STR:RPRED 94.5 SQ:SECSTR ####################################HHccTTccTTTcHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHHHccHHcccccccHHHHHHHHHHHHHHccHHHHHHTTHHHHHHHHHTTccTTccccHHHHHTcccccccEEEEEEETTEEEEEEEEEEccccccccTHHHHTTTTccccHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHcccGGGGccHHHHcEEEEHHHHHHHcTTccHHHHHHHHcccTTcEEEEccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHH#HHccccHTTccTHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHTTcTTccHHHHHHHHHHHHHcEEEEEccGGGGcHHHHHHHTTcHHHHHHHHHHHHHHHHHTTTTccccTTcccccTTccccEEETTTTEEEEEGGGccTTTccTTccHHHHHHTHHHHHHHHHHHTTcTTGGGccTTccccccccHHHHHHHHHHHHHHHHHHTTccHcccccccTTTTHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHTcEEEcHHHHHHHHHHcccccHHHHHHHHHHTcHHHHHHHTccTTcTTccccHHccccc DISOP:02AL 1-1,92-100,594-598,601-602,626-635| PSIPRED cHHHHHHHHHHHHHHccccccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHcccccccEEEEEEccccccEEEEEEcccccccccHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHcccHHHHHccccHHHHHHHcccccHHHHHHHHccccccEEEEccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccEEEcccccEEEEEcHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHcEEEEEHHccHHHHHHccccccccccccHHHEEEcc //