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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39246.1
DDBJ      :             Peptidase S1C, Do
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  873/915 : Eukaryota  91/199 : Viruses  0/175   --->[See Alignment]
b.36.1b.47.1
:526 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   71->518 2zleA PDBj 8e-63 38.9 %
:RPS:PDB   146->296 3ee1A PDBj 2e-34 12.0 %
:RPS:PDB   289->402 2ehrA PDBj 4e-19 16.7 %
:RPS:PDB   434->520 3dj1B PDBj 1e-07 18.7 %
:RPS:SCOP  146->307 2bhgA1  b.47.1.4 * 1e-33 19.7 %
:RPS:SCOP  280->397 1nf3C  b.36.1.1 * 1e-23 17.8 %
:RPS:SCOP  448->499 1sotA1  b.36.1.4 * 4e-09 28.8 %
:HMM:SCOP  30->325 1qtfA_ b.47.1.1 * 3.4e-64 46.3 %
:HMM:SCOP  314->410 1lcyA1 b.36.1.4 * 1.9e-28 46.8 %
:HMM:SCOP  432->526 1y8tA1 b.36.1.4 * 5.3e-14 37.6 %
:RPS:PFM   314->394 PF00595 * PDZ 3e-08 47.3 %
:HMM:PFM   308->392 PF00595 * PDZ 1.8e-12 26.3 76/81  
:HMM:PFM   435->486 PF00595 * PDZ 3.5e-09 38.8 49/81  
:HMM:PFM   144->300 PF00089 * Trypsin 2.2e-14 24.5 155/219  
:BLT:SWISS 71->523 DEGP_BRUME e-121 53.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39246.1 GT:GENE ABE39246.1 GT:PRODUCT Peptidase S1C, Do GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2249476..2251056 GB:FROM 2249476 GB:TO 2251056 GB:DIRECTION + GB:PRODUCT Peptidase S1C, Do GB:PROTEIN_ID ABE39246.1 GB:DB_XREF GI:91682944 InterPro:IPR001254 InterPro:IPR001478 InterPro:IPR001940 InterPro:IPR011782 LENGTH 526 SQ:AASEQ MTDRNTDLPSQPSRQPDRRSLLSARKFALMASVVAGLGAGAFGLSQTSTPVDLFSTPAHAQVGNKVNQAQQPVGFADIVEKVKPSVISVKVNIAEKTAKNEDRAEDSPFQPGSPMERFFRRFGGEMPPGMRGHRGGGTMTGQGSGFFISADGYAVTNNHVVDGADKVEVTTDDGKTYKAKVIGTDQRTDLALIKAEGRTDFPFAKLSEGKPRIGDWVLAVGNPFGLGGTVTAGIVSASGRDIGNGPYDDFIQIDAPVNKGNSGGPAFDTNGEVMGVNTAIYSPSGGSVGIAFSIPASTVKTVVQQLKDKGSVSRGWIGVQIQPVTPEIADSLGLKKPDGALVAEPQPNGPAAKAGIESGDVITAVNGTPVKDARELARTIGGFAPGNTVKLTVVHKGADRELNLTLGQLPNQVEAKVNDGGDNGNSSSRGTEVPRLGLTVAPASSVAGAGKDGVVVTDVDPKSAAADRGFKEGDVILEVAGKNVASPGDVREAINTAKADNKNSVLIRVRSGGSSRFVAVPISAKG GT:EXON 1|1-526:0| BL:SWS:NREP 1 BL:SWS:REP 71->523|DEGP_BRUME|e-121|53.8|446/513| SEG 31->45|asvvaglgagafgls| SEG 123->145|ggemppgmrghrgggtmtgqgsg| SEG 418->428|ndggdngnsss| BL:PDB:NREP 1 BL:PDB:REP 71->518|2zleA|8e-63|38.9|391/396| RP:PDB:NREP 3 RP:PDB:REP 146->296|3ee1A|2e-34|12.0|133/336| RP:PDB:REP 289->402|2ehrA|4e-19|16.7|114/117| RP:PDB:REP 434->520|3dj1B|1e-07|18.7|86/110| RP:PFM:NREP 1 RP:PFM:REP 314->394|PF00595|3e-08|47.3|74/82|PDZ| HM:PFM:NREP 3 HM:PFM:REP 308->392|PF00595|1.8e-12|26.3|76/81|PDZ| HM:PFM:REP 435->486|PF00595|3.5e-09|38.8|49/81|PDZ| HM:PFM:REP 144->300|PF00089|2.2e-14|24.5|155/219|Trypsin| GO:PFM:NREP 1 GO:PFM GO:0005515|"GO:protein binding"|PF00595|IPR001478| RP:SCP:NREP 3 RP:SCP:REP 146->307|2bhgA1|1e-33|19.7|152/194|b.47.1.4| RP:SCP:REP 280->397|1nf3C|1e-23|17.8|118/123|b.36.1.1| RP:SCP:REP 448->499|1sotA1|4e-09|28.8|52/78|b.36.1.4| HM:SCP:REP 30->325|1qtfA_|3.4e-64|46.3|218/0|b.47.1.1|1/1|Trypsin-like serine proteases| HM:SCP:REP 314->410|1lcyA1|1.9e-28|46.8|94/100|b.36.1.4|1/2|PDZ domain-like| HM:SCP:REP 432->526|1y8tA1|5.3e-14|37.6|85/0|b.36.1.4|2/2|PDZ domain-like| OP:NHOMO 2569 OP:NHOMOORG 993 OP:PATTERN --1----1111111111111111-111112-1--1-----------1-----------------1-13 2482611211111134433-33444333333434543353344433113221344211113521325344211111111111512222112112111--1111123212211111111111111121111111131333654444363473342233333433233554753322223322236633322-423222222222222222223333223122432211111136222222222222222222221111111111111111111122211111111111111111111111111111111111111111111111211311111111111423322223231142221222222223322221-222A3337333337499A8436466333333333333-67666654473173336767553443333312333322333333333233349331111111111111111111211111111122122122222444544334445545444444554444322543553423443422332422221111111223363231121232432221232342242555586351111111111111111111121121332222234222222222222222222222221-2323411-11133332333333333333-3333333333333333333333332223333333333333333333332333133333333333311321111222225342212222222221222223222222223322222222222222322---------12222222222222222222222222222--4133333311121222331-------------111---------1111111111463 1---111-1---111---------------------------------------------------------------------------------------------A-25544c24313454752749J4-439132255433142224216454431-111--11121--214454r44476977A-793421117 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 435 STR:RPRED 82.7 SQ:SECSTR ######################################################################cccccHHHHHHHGGGEEEE##EEEEEEEEccccccccTTcccccEEEEEEEEEEEE###################cccHHHHHHHHHHHHHTTcHHHHHHHHHTTcTTTTcccHHHHHHHHHHHHHHHHHHHHcTccccccccEEEEEEEEccccEcEEEEEEEccEEEccccEcGEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHccccTGGGcEEEEEEEEccccHTTccEEEEcTTccEEEEccEHHHHHHHHHHHHTTcccccEEccEEETTEEEEEEEcTTccEEEEcccccccGGGTTcccccccTTccccEEEEETTEEEEEEEEEcccEcccEEEEcccTTcccccGGGccHHHHHccccHHHHTcTTcTTccEEEEEEEEETTGGGTccTTcEEccccccccccHHHHHHHHHTcTcTGccccEEEEEETTEEEEccccccccc DISOP:02AL 1-4,6-22,58-73,94-111,408-437,525-527| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccccccccccHHHHHHHHcccEEEEEEEEEEEccccccccccccccccccHHHHHHHccccccccccccccccEEEccccEEEEEcccEEEEEHHHcccccEEEEEEccccEEEEEEEEEcccccEEEEEEEccccccEEEccccccccccEEEEEEccccccccEEEEEEEEccccccccccccEEEEEEEccccccccEEEcccccEEEEEEEEEcccccccccEEEEEEHHHHHHHHHcccccccccccccEEEEEccHHHHHcccccccccEEEEEEEcccHHHHcccccccEEEEEccEEcccHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEccccccccccccccccccccccccccccccccEEccccccccccccEEEEEcccccHHHHcccccccEEEEEccEEcccHHHHHHHHHHHccccccEEEEEEEEccEEEEEEEEEcccc //