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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39268.1
DDBJ      :             Coenzyme PQQ biosynthesis protein E
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  268/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:395 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->184 1tv7B PDBj 4e-09 26.1 %
:RPS:PDB   5->319 3ciwA PDBj 2e-25 8.3 %
:RPS:SCOP  27->310 1tv7A  c.1.28.3 * 4e-32 21.4 %
:HMM:SCOP  34->341 1tv8A_ c.1.28.3 * 6.5e-68 30.8 %
:RPS:PFM   39->102 PF04055 * Radical_SAM 7e-07 42.2 %
:HMM:PFM   40->194 PF04055 * Radical_SAM 6.9e-23 24.0 154/166  
:HMM:PFM   226->260 PF10842 * DUF2642 0.00044 39.4 33/66  
:BLT:SWISS 20->394 PQQE_BRAJA e-178 78.4 %
:PROS 41->52|PS01305|MOAA_NIFB_PQQE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39268.1 GT:GENE ABE39268.1 GT:PRODUCT Coenzyme PQQ biosynthesis protein E GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2278432..2279619 GB:FROM 2278432 GB:TO 2279619 GB:DIRECTION + GB:PRODUCT Coenzyme PQQ biosynthesis protein E GB:PROTEIN_ID ABE39268.1 GB:DB_XREF GI:91682966 InterPro:IPR000385 InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR011843 LENGTH 395 SQ:AASEQ MSASIDRPTSAVDPADGVAVLETRGSVAESFGIPLAVLLELTHRCPLQCPYCSNPVELERGGAELSTDEWKRVLSELAAIGVLQIHFSGGEPTARKDLDELVRHASEVGLYTNLITSAVLLTRVRLAALADAGLCHVQISFQGNEPAVADRVAGFASAHAKKIEVARWTRELDLPLTVNAVMHRQNLHQLPDIIEMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIEGCTAIVETARERLKGVLAIDYVIPDYYALRPKKCMGGWGRQFFNISPSGRVLPCHAAETITGLVFDSVRDGKSIAEIWRSSEAFNRYRGTGWMQEPCASCAFKDIDFGGCRCQAFALTGDAAATDPACALSPLHERIFKTAEAEAAQGSDRFLYRNFAGGTAEA GT:EXON 1|1-395:0| BL:SWS:NREP 1 BL:SWS:REP 20->394|PQQE_BRAJA|e-178|78.4|375/380| PROS 41->52|PS01305|MOAA_NIFB_PQQE|PDOC01009| SEG 118->130|avlltrvrlaala| BL:PDB:NREP 1 BL:PDB:REP 27->184|1tv7B|4e-09|26.1|157/326| RP:PDB:NREP 1 RP:PDB:REP 5->319|3ciwA|2e-25|8.3|312/344| RP:PFM:NREP 1 RP:PFM:REP 39->102|PF04055|7e-07|42.2|64/164|Radical_SAM| HM:PFM:NREP 2 HM:PFM:REP 40->194|PF04055|6.9e-23|24.0|154/166|Radical_SAM| HM:PFM:REP 226->260|PF10842|0.00044|39.4|33/66|DUF2642| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 27->310|1tv7A|4e-32|21.4|271/327|c.1.28.3| HM:SCP:REP 34->341|1tv8A_|6.5e-68|30.8|302/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 487 OP:NHOMOORG 329 OP:PATTERN 11-21231333333432322223221221421--111-1111-33-2-635443-111------3--- -211--11------11111-11--1211111111112111-2-3----1------------111--2------------2211----1-----------------1-1-----------------1--12---1-----------1--11------------------11----------------112---1-11111--1-1-1-----11-111--11---1-------------------------------------------------------------------------------------------112----13-21----------1-22------4--1--12223331-211--111---1-1--------11111-1-22311------------11111111----1-----1---11-1---2-111112-11111111111112-------------------------------------------2111111111111-11111-1-112111--12111-11-1--11--11111------------112-32212222322221121142511----1136--------------------1--11------1-2----------------------1---1----------1----1------------------------------111--------------------------------------------------------1-11----------------111-111---1-222212211111131111----1--------------------11111111---------------------------------------------------11-1-----1-2 -1--------------------------------------------------------------------------------------------------2------1--------1--------------------------------------------------------------811-1--23----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 325 STR:RPRED 82.3 SQ:SECSTR ####cHHHHHHHHHcccHHHHHHHHHHHHHHEEEEEEEEEEEcccccccTTcTTcTccccccccccHHHHHHHHHHHHHTTccEEEEEEcccGGTTHHHHHHHHHHHTTTcEEEEEccccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEccEEccTTccHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTcccccHHHHHHHHHHHcTTccccccHHHHHHcTTHHHHHHTTccccccTTTGGGccccTTcTTTTccTTcHHHHcHHHHHHTTTcEEcccccccccccccccccc##cccc################################################################ DISOP:02AL 1-4,389-396| PSIPRED ccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccHHHHcccHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEcccccEEEccccccccccccccccccccHHHHHHcHHHHHHHcccccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccEEEEccccccccc //