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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39276.1
DDBJ      :             Patatin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  49/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.19.1
:397 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  68->264 1oxwA  c.19.1.3 * 5e-13 13.7 %
:HMM:SCOP  64->257 1oxwA_ c.19.1.3 * 8.6e-32 35.4 %
:HMM:PFM   71->256 PF01734 * Patatin 6.9e-21 26.6 177/204  
:HMM:PFM   3->25 PF08139 * LPAM_1 4.8e-05 42.9 21/26  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39276.1 GT:GENE ABE39276.1 GT:PRODUCT Patatin GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2289189..2290382 GB:FROM 2289189 GB:TO 2290382 GB:DIRECTION + GB:PRODUCT Patatin GB:PROTEIN_ID ABE39276.1 GB:DB_XREF GI:91682974 InterPro:IPR002641 LENGTH 397 SQ:AASEQ MRNIQRSLVVPLVIALSGLLAGCASQPRVPYTAAEAADARVLDLTNLRRYADEPAAAFRDDKLIAGPRTYLALSGGGADGAYGAGVLNGWTETGTRPSFSIVSGVSTGALIAPFAFLGPQYDPTLREFYTSGIAESLLDSLNPFNAIFGSGLFGNTRLRELVAQYIDADFVAAVAAEHAKGRLLFVVTTNLDSQRAVIWNLGRIASLHTMEGLNLFRDVVAASASLPAVFPPMLVNAQAAGVRFQEMHVDGGVTAPVLTLPEAYLLRNASWGKSLDLQLYILMNNKIEPEFQVVQNRTLEIAARSSSTLIKAQTRSILYTTYDFARRNKYGFNLTYIETERPPSPTGFDTAYMRALFQYGYDRARSGHAWSKSPPPLGPAVAPVADTAPVRRLAGAN GT:EXON 1|1-397:0| TM:NTM 1 TM:REGION 5->27| SEG 75->85|gggadgaygag| SEG 167->176|dadfvaavaa| SEG 374->390|ppplgpavapvadtapv| HM:PFM:NREP 2 HM:PFM:REP 71->256|PF01734|6.9e-21|26.6|177/204|Patatin| HM:PFM:REP 3->25|PF08139|4.8e-05|42.9|21/26|LPAM_1| RP:SCP:NREP 1 RP:SCP:REP 68->264|1oxwA|5e-13|13.7|182/360|c.19.1.3| HM:SCP:REP 64->257|1oxwA_|8.6e-32|35.4|181/0|c.19.1.3|1/1|FabD/lysophospholipase-like| OP:NHOMO 65 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------4221-----11112--122111------------22222221-1--2-----1-1----------------------------------------------------------------------------------------1---------1----1----------------------------------------------1----------------------------------------------------------------------------1-------1------------------------------------------------------------------------------11111111111---------1111-------------------------------------------------1------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5,396-398| PSIPRED ccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHccccHHHccHHHHHccccEEEEEEcccccccHHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHcccccHHHHHHHHcccHHHHHcccHHHHHHccHHHHccHHHHHHHHHHccHHHHHHHHcccccccEEEEEEEEccccHHHHHHcccHHHcccHHHHHHHHHHHHHHHccccccccEEEEEEEccEEEEEEEEccccccHHHHcHHHHHcccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccc //