[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39285.1
DDBJ      :             TRAP dicarboxylate transporter- DctM subunit
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  307/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:613 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   15->204,365->578 PF06808 * DctM 2e-32 48.9 %
:HMM:PFM   14->578 PF06808 * DctM 1.9e-117 40.1 414/416  
:BLT:SWISS 4->192,488->578 YGIK_SALTY 1e-14 33.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39285.1 GT:GENE ABE39285.1 GT:PRODUCT TRAP dicarboxylate transporter- DctM subunit GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2298539..2300380) GB:FROM 2298539 GB:TO 2300380 GB:DIRECTION - GB:PRODUCT TRAP dicarboxylate transporter- DctM subunit GB:PROTEIN_ID ABE39285.1 GB:DB_XREF GI:91682983 InterPro:IPR004681 InterPro:IPR010656 LENGTH 613 SQ:AASEQ MTAMFIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPDRVYGVMNNDTLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGSIRGGIAYAVVFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRVATGVIAASGTLAQIIPPSLVLIVMADQLGRSVGDMYEGAFIPGIVLSLLYAGYIFLVTVFAPKAVPGLPLEAQTLREHGTLQSPMILPLAAISAAAAAYFFAVHLDGFSWSMPAFDKVGLSTLVMQGFWFVILLAVLFRPFIGLIRTMTTSLYLVVVLSTTIGIIAMRYTEVKSGADYVVLTMSVTVGLSFVIAVINRFLRLKLLSKLAEQVVFVMVPPLGLIFLVLGTIFIGVATPTEGGAMGAAGAVILALMKGRLTFDLTRQATEATAKLSAFVVMILVGARVFSLTFYGVDGHRWVEELLVGLPGGQLGFLIFVNAFVFVLAFFLDFFELAFIVIPLLGPAAEKLGIDLIWFGVIMAVNMQTSFMHPPFGFALFYLRSVAPKESYLDRVTGKRMAPVTTGQIYWGAVPFVIIQLIMVALVITFPAMVMHYKGVASTVDPSKVQIDIPQMETPQLDFGPPKF GT:EXON 1|1-613:0| BL:SWS:NREP 1 BL:SWS:REP 4->192,488->578|YGIK_SALTY|1e-14|33.2|260/435| TM:NTM 16 TM:REGION 1->23| TM:REGION 27->49| TM:REGION 112->134| TM:REGION 151->173| TM:REGION 188->210| TM:REGION 231->253| TM:REGION 269->291| TM:REGION 298->320| TM:REGION 324->346| TM:REGION 360->382| TM:REGION 392->414| TM:REGION 420->442| TM:REGION 446->468| TM:REGION 472->494| TM:REGION 504->526| TM:REGION 557->579| SEG 113->126|vgallaattgvvaa| SEG 238->250|aaisaaaaayffa| SEG 462->486|flifvnafvfvlaffldffelafiv| RP:PFM:NREP 1 RP:PFM:REP 15->204,365->578|PF06808|2e-32|48.9|385/412|DctM| HM:PFM:NREP 1 HM:PFM:REP 14->578|PF06808|1.9e-117|40.1|414/416|DctM| OP:NHOMO 888 OP:NHOMOORG 309 OP:PATTERN ------------------------------------------------------------1------- ----------------------------------------------------------------------1----------------------1----------1---1-------------------------1111111-----111-11--------1-1-1--11-1-1-----1-------22---------------------42--------11-4------------------------------1----------------------------------------------------------------------4------------------------1---1--23-2-1--21-----1-----11--------C991147456611111111114-22322523712-25512265339963212EDB6ABBFBG--------1----421-----------------------------3-----2HE8G2222211----222------2212425213---5324332F7B63231---12--------1-354-2D154741-5332-1211-111-1111---1-22-1-------1-------12311------234-2-921111-1-111111--114---11-2------21--11----2-222-------122-2--1------2----111-1-1-1-11111-1--12---------111111111111---1----------17FM---412-2221-333-------11-113343-112521125121---------2--143333344457----------------2-11---------------------------------------------11121--- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,612-614| PSIPRED cccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccccccc //