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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39300.1
DDBJ      :             cysteinyl-tRNA synthetase
Swiss-Prot:SYC_RHOPS    RecName: Full=Cysteinyl-tRNA synthetase;         EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase;         Short=CysRS;

Homologs  Archaea  60/68 : Bacteria  906/915 : Eukaryota  190/199 : Viruses  1/175   --->[See Alignment]
a.27.1c.26.1
:463 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->382 1u0bB PDBj 1e-88 49.6 %
:RPS:PDB   1->277 3e4cB PDBj 2e-53 14.7 %
:RPS:PDB   273->342 2ab5B PDBj 2e-05 11.5 %
:RPS:PDB   320->450 3e98A PDBj 5e-19 12.3 %
:RPS:SCOP  3->341 1li5A2  c.26.1.1 * 2e-40 49.7 %
:RPS:SCOP  359->460 1u0bB1  a.27.1.1 * 2e-12 34.0 %
:HMM:SCOP  2->341 1li5A2 c.26.1.1 * 3.2e-83 35.2 %
:HMM:SCOP  335->462 1u0bB1 a.27.1.1 * 4.2e-24 36.6 %
:RPS:PFM   16->338 PF01406 * tRNA-synt_1e e-104 63.6 %
:HMM:PFM   17->339 PF01406 * tRNA-synt_1e 3.7e-109 50.3 298/301  
:HMM:PFM   360->386 PF09190 * DALR_2 3.2e-06 37.0 27/63  
:BLT:SWISS 1->463 SYC_RHOPS 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39300.1 GT:GENE ABE39300.1 GT:PRODUCT cysteinyl-tRNA synthetase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2313085..2314476 GB:FROM 2313085 GB:TO 2314476 GB:DIRECTION + GB:PRODUCT cysteinyl-tRNA synthetase GB:PROTEIN_ID ABE39300.1 GB:DB_XREF GI:91682998 InterPro:IPR002308 LENGTH 463 SQ:AASEQ MALRLYDTLTKEKRDFAPLDPSRVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGENHVKYVRNITDVDDKINDRAARDYPGLPLNESIRKVTEQTERQFHDDVDALGCLRPTVEPRATEHIGEMRTIIDRLVEGGFAYVADDHVLFSPGAMNAADSVLPRYGALANRSLDEMIAGARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMSWKHLGETFDIHGGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFVTIRELLATEKFGGRKWDGATLRLAMLKTHYRQPIDWTADALHEAEKAIFDWSDFTKDATPGSCDDVIAALTDDLNTPKMIAELHALRRAGKADELCGAMELLGISPVVRGTVDLDATAKSLIDARTAARARKDFKESDRIRDELAAMGIAIKDGKDSDGKPVTTWEIAR GT:EXON 1|1-463:0| SW:ID SYC_RHOPS SW:DE RecName: Full=Cysteinyl-tRNA synthetase; EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase; Short=CysRS; SW:GN Name=cysS; OrderedLocusNames=RPD_2065; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->463|SYC_RHOPS|0.0|100.0|463/463| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 3->382|1u0bB|1e-88|49.6|355/461| RP:PDB:NREP 3 RP:PDB:REP 1->277|3e4cB|2e-53|14.7|251/269| RP:PDB:REP 273->342|2ab5B|2e-05|11.5|61/246| RP:PDB:REP 320->450|3e98A|5e-19|12.3|130/176| RP:PFM:NREP 1 RP:PFM:REP 16->338|PF01406|e-104|63.6|297/300|tRNA-synt_1e| HM:PFM:NREP 2 HM:PFM:REP 17->339|PF01406|3.7e-109|50.3|298/301|tRNA-synt_1e| HM:PFM:REP 360->386|PF09190|3.2e-06|37.0|27/63|DALR_2| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF01406|IPR015803| GO:PFM GO:0004817|"GO:cysteine-tRNA ligase activity"|PF01406|IPR015803| GO:PFM GO:0005524|"GO:ATP binding"|PF01406|IPR015803| GO:PFM GO:0005737|"GO:cytoplasm"|PF01406|IPR015803| GO:PFM GO:0006412|"GO:translation"|PF01406|IPR015803| GO:PFM GO:0006423|"GO:cysteinyl-tRNA aminoacylation"|PF01406|IPR015803| RP:SCP:NREP 2 RP:SCP:REP 3->341|1li5A2|2e-40|49.7|298/299|c.26.1.1| RP:SCP:REP 359->460|1u0bB1|2e-12|34.0|97/146|a.27.1.1| HM:SCP:REP 2->341|1li5A2|3.2e-83|35.2|315/315|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 335->462|1u0bB1|4.2e-24|36.6|123/0|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases|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ccccccTTTccEEEEEEEccccccccccccTTHHHHHHHHHHHHHTTEEEEEEEcccHHHHHHHHHHHHHcTcHHHHGGGGGcccEEEEEEEEEETTEEEcTTccTTccEGGGcEEcHHHHHHHHcTTTcGGGTTccEEEEEEEETTccTTTcTTTcccHHHHHHcccccccHHHHHccccccEEEEEEcccccccccccccTTccccccHHHHHHHHHHHTTTccHHHHHHHHHHHTccccccHccccEEEcccccccccccTTcccccHHHHHHTTccHHHHHHHHHHHHHHHTTccHHHHHHHHHTccTTccccccHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHcTccHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHTTccccccccccccccccccccccccccccccccG############# DISOP:02AL 179-188,284-286,463-464| PSIPRED ccEEEEEcccccEEEEEccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHccHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccEEEEcccEEEEHHHHHHcccccccccHHccccHHHHHccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHcccEEcHHHHHHccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEcccccccccccccccc //