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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39322.1
DDBJ      :             beta-ketoacyl synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:426 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->423 1b3nA PDBj 7e-63 36.8 %
:RPS:PDB   13->423 2byzA PDBj 7e-69 32.6 %
:RPS:SCOP  13->223 1tqyB1  c.95.1.1 * 8e-27 22.4 %
:RPS:SCOP  226->423 1tqyB2  c.95.1.1 * 3e-59 31.2 %
:HMM:SCOP  10->264 1e5mA1 c.95.1.1 * 6.3e-43 35.0 %
:HMM:SCOP  226->425 1tqyA2 c.95.1.1 * 1.9e-63 46.0 %
:RPS:PFM   13->259 PF00109 * ketoacyl-synt 2e-15 36.6 %
:RPS:PFM   285->382 PF02801 * Ketoacyl-synt_C 3e-16 49.0 %
:HMM:PFM   267->382 PF02801 * Ketoacyl-synt_C 2.4e-35 41.4 116/119  
:HMM:PFM   13->257 PF00109 * ketoacyl-synt 2.9e-34 27.2 217/253  
:BLT:SWISS 13->423 FABF_COXBU 3e-69 39.0 %
:PROS 167->183|PS00606|B_KETOACYL_SYNTHASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39322.1 GT:GENE ABE39322.1 GT:PRODUCT beta-ketoacyl synthase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2338177..2339457) GB:FROM 2338177 GB:TO 2339457 GB:DIRECTION - GB:PRODUCT beta-ketoacyl synthase GB:PROTEIN_ID ABE39322.1 GB:DB_XREF GI:91683020 InterPro:IPR000794 LENGTH 426 SQ:AASEQ MTAMHDKFGRPIVVVTGMGVVTSLGAGKTDNWTKLTAGESGIRTITRFPIDGLKTTMAGTVDFVPVEPFSSTVLGEKLADIATEEAIAQAGIGRKGDFPGPLFLAVAPVELEWLPRQELARATGANTAIDYDALLRVSGGGRFTHYHHRFQFGSVADHLAETFGTKGSPISLSTACASGASAIQLGVEAIRRGEADAALCVATDGSVNAEALIRFSLLSALSTQNDPPQASAKPFAKNRDGFVMAEGAGALVLESYQSAVARGAAILGVVAGCGELADSFHRTRSSPDGKPIIGCIKKTLADAGLGVEQIDYINAHGTGTPENDKMEYLGISSMFGERASTIPVSSNKSMVGHTLSAAGAVEAIFSLLTLEHQRIPPTINYDVPDPAIPLDVVPNKARDARVTAVMSNSFGFGGQNASLILTREPV GT:EXON 1|1-426:0| BL:SWS:NREP 1 BL:SWS:REP 13->423|FABF_COXBU|3e-69|39.0|395/414| PROS 167->183|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| BL:PDB:NREP 1 BL:PDB:REP 13->423|1b3nA|7e-63|36.8|405/411| RP:PDB:NREP 1 RP:PDB:REP 13->423|2byzA|7e-69|32.6|389/405| RP:PFM:NREP 2 RP:PFM:REP 13->259|PF00109|2e-15|36.6|235/245|ketoacyl-synt| RP:PFM:REP 285->382|PF02801|3e-16|49.0|98/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 267->382|PF02801|2.4e-35|41.4|116/119|Ketoacyl-synt_C| HM:PFM:REP 13->257|PF00109|2.9e-34|27.2|217/253|ketoacyl-synt| RP:SCP:NREP 2 RP:SCP:REP 13->223|1tqyB1|8e-27|22.4|196/208|c.95.1.1| RP:SCP:REP 226->423|1tqyB2|3e-59|31.2|192/194|c.95.1.1| HM:SCP:REP 10->264|1e5mA1|6.3e-43|35.0|237/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 226->425|1tqyA2|1.9e-63|46.0|200/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 4193 OP:NHOMOORG 1052 OP:PATTERN -------------------------------------------------------------------- 2371L2233331-1EDDKK-KDCCT9KJKKKEFDCD74572QDO1111121123211411MJ21U5SXHT31111111-1112111111114111111-257553J66241111111111111111111211111122255111J346456691111222211322EDCW51111111111111111111121M1111111121111111211471121114111111111A3111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111M1551111112--1211211311111111111111317222233333754333344633333333333333-4464654447425668446555554853253433333441111111113322213111111111111111111111111111111211112221553342GE99B83345EEEE2I564222312568123324336732332223311122221223225143251243142221343522A463313YM331321111111111111111111111334432275335466666566666666666661-22221111111B293243255A288322-522222323353522222433483B8422222222222222225223222221746566545565112435333766743B5611113111111133111441132214A44358D66352622879411111111234481222224644443333333322222212--1111--------1-1-------------------------1111111111191 1152fs3-311-1127DI8UGIMRfTW222444KL96BAC89B344LHEMGFECA9SPE878111111-1111111111111111111-123D112------4111-183N44243-2121222412213A2-2231111222411211-31142632122229817547954872345v7367A8459K473351223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 426 STR:RPRED 100.0 SQ:SECSTR cccTTccTTTccEEEEEEEEEcTTcccHHHHHHHHHHTcccEEEcHHHHHTTccccEEEccccccTTcccHHHHHHHHHHHHHHHHHHHHTccccTTTGGGEEEEEcHHHHTTcTTEEEEEcccccHHHHHHHHHHHTcccTHHHHcccHHHHHcTTHHHHHTTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEccccHHHHHHHHTTTcccccTTcGGGTccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEcccccccHHcccHHHHHHHHHHTTTccccGccccEEEccccccHHHHHHHHHHHHHHHTTccGGcEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEccccccccccGGGcccccccccEEccccEEEEEEEETTTEEEEEEEEcccc DISOP:02AL 1-12,285-289| PSIPRED ccccccccccccEEEEEEEEEEcccccHHHHHHHHHccccccEEccccccccccccccEEEccccHHHccccHHHHHHHHHHHHHHHHHccccHHHHccccEEEEEEccccccccccEEEEEEccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEEEEEcHHHHHHcccEEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHccccHHHccEEEccccccccccHHHHHHHHHHHcccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEEcccc //