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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39366.1
DDBJ      :             cation diffusion facilitator family transporter
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  494/915 : Eukaryota  98/199 : Viruses  0/175   --->[See Alignment]
d.52.9f.59.1
:305 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   215->292 3byrA PDBj 9e-13 19.5 %
:RPS:SCOP  25->216 2qfiA2  f.59.1.1 * 4e-22 14.6 %
:RPS:SCOP  219->292 2qfiA1  d.52.9.1 * 9e-12 17.8 %
:RPS:PFM   25->292 PF01545 * Cation_efflux 1e-32 34.6 %
:HMM:PFM   24->296 PF01545 * Cation_efflux 2e-69 39.2 273/285  
:BLT:SWISS 24->305 CZCD_RALME 5e-49 47.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39366.1 GT:GENE ABE39366.1 GT:PRODUCT cation diffusion facilitator family transporter GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2387604..2388521 GB:FROM 2387604 GB:TO 2388521 GB:DIRECTION + GB:PRODUCT cation diffusion facilitator family transporter GB:PROTEIN_ID ABE39366.1 GB:DB_XREF GI:91683064 InterPro:IPR002524 LENGTH 305 SQ:AASEQ MTGDKQPKDSIAAGTAASRHKGKLIVAFGLTSSFMILEVIGGLWTGSLALLADAAHMLTDAGGLALALIAIQFAERARTPKNTFGYVRLEVLSALTNAVVLLLLTVYILYEAYQRFKSPPDIIGGPMLLVAFAGLVVNFISMRLLAGGSKESLNVKGAYFEVLADLLGSLGVVAAAVVVLLTGWKPIDPIIGAGIGLFIVPRTWTLMTQAVHILMEGTPPQVDMKLLEQTLLLVPGTVVVKDLHVWSVTSGFDAMSCHLVVDDSGARDTILAAAQAAMSTFFGLTHVTIQIEGTPHDRAEIEQRF GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 24->305|CZCD_RALME|5e-49|47.5|282/316| TM:NTM 7 TM:REGION 28->50| TM:REGION 55->76| TM:REGION 88->110| TM:REGION 123->145| TM:REGION 161->183| TM:REGION 192->214| TM:REGION 224->246| SEG 61->71|agglalaliai| SEG 91->106|vlsaltnavvlllltv| SEG 162->181|vladllgslgvvaaavvvll| RP:PDB:NREP 1 RP:PDB:REP 215->292|3byrA|9e-13|19.5|77/89| RP:PFM:NREP 1 RP:PFM:REP 25->292|PF01545|1e-32|34.6|266/282|Cation_efflux| HM:PFM:NREP 1 HM:PFM:REP 24->296|PF01545|2e-69|39.2|273/285|Cation_efflux| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF01545|IPR002524| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF01545|IPR002524| GO:PFM GO:0016020|"GO:membrane"|PF01545|IPR002524| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01545|IPR002524| RP:SCP:NREP 2 RP:SCP:REP 25->216|2qfiA2|4e-22|14.6|192/204|f.59.1.1| RP:SCP:REP 219->292|2qfiA1|9e-12|17.8|73/82|d.52.9.1| OP:NHOMO 841 OP:NHOMOORG 604 OP:PATTERN ------------------------1-------1----------1----1-11---111111------- 111-1111111111111----11131-----11111431211--31131--131211-11222111111111111111----111111111---11----1-111-1------------------11--11--121-----1-111-111----------1-----1-2---------------11--11121111111121-1111111-111111123211111111112212222222222222222211-1111111111111111---111111-------2--------------------------1------------1---------------------------------------------11111113-----111121-311311-111-111112-22112131-11-------1-----1111-4-11-11--1111111111111111-11111111-----------------1111-21111-----111-11-----1111-----1--2---111-1-1--1111-1--21111-11-------1-111111111--1--------1111111111111211-1111-11111-------------1122---31112211-----12----2---121----1---------11---11111-111111-1111-1111111111111111111--1111111111111111111111111--111111111111---211111111111-11---1-----------1111121-11--1112-1-1-11112------------2---1---1-11--111112111111111----222222------------------------------------111111-111--- 111111--521---2-------------------------------1111-111-----------------1------1---------------------1--322-12153711453-1233363151AH6-6572242412311311232132243----1111--13-2431111-----122114-61--43241 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 24.9 SQ:SECSTR #######################################################################################################################################################################################################################cccccHHHHHHHHHHHHHHTTccEEEEEEEEEETTEE#EEEEEEEccTTHHHHHHHHHHHHHHHHHcTTEEEEEEEE############# DISOP:02AL 1-22,298-306| PSIPRED ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccEEEEccccEEEEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHcccc //