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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39379.1
DDBJ      :             Heavy metal efflux pump CzcA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  662/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.55.1d.225.1d.58.44f.35.1
:1070 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->1047 2v50A PDBj 5e-43 22.6 %
:RPS:PDB   5->1025 2dhhA PDBj e-174 20.6 %
:RPS:SCOP  64->225 1mwkA2  c.55.1.1 * 5e-35 15.9 %
:RPS:SCOP  235->333 1iwgA2  d.58.44.1 * 8e-22 21.2 %
:RPS:SCOP  326->506 1iwgA7  f.35.1.1 * 1e-14 13.8 %
:RPS:SCOP  567->668 1iwgA3  d.58.44.1 * 6e-15 13.1 %
:RPS:SCOP  725->831 1iwgA6  d.225.1.1 * 5e-15 14.8 %
:RPS:SCOP  842->1054 1iwgA8  f.35.1.1 * 2e-22 22.5 %
:HMM:SCOP  42->127 1iwgA1 d.58.44.1 * 3e-22 40.7 %
:HMM:SCOP  154->333 1iwgA2 d.58.44.1 * 3.2e-19 37.9 %
:HMM:SCOP  299->508 1iwgA7 f.35.1.1 * 5.3e-31 31.8 %
:HMM:SCOP  566->672 1iwgA3 d.58.44.1 * 0.00019 18.3 %
:HMM:SCOP  725->831 1iwgA5 d.225.1.1 * 3.5e-12 31.8 %
:HMM:SCOP  826->1056 1iwgA8 f.35.1.1 * 5.6e-55 41.0 %
:RPS:PFM   8->1048 PF00873 * ACR_tran e-155 36.3 %
:HMM:PFM   6->1050 PF00873 * ACR_tran 0 38.6 1009/1021  
:BLT:SWISS 1->1049 HELA_LEGPN 0.0 61.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39379.1 GT:GENE ABE39379.1 GT:PRODUCT Heavy metal efflux pump CzcA GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2402875..2406087 GB:FROM 2402875 GB:TO 2406087 GB:DIRECTION + GB:PRODUCT Heavy metal efflux pump CzcA GB:PROTEIN_ID ABE39379.1 GB:DB_XREF GI:91683077 InterPro:IPR001036 InterPro:IPR004763 LENGTH 1070 SQ:AASEQ MIEKLLAFSVRQRWLVMIGVLMMAAFGAWNFTRLPIDAVPDITNVQVQINTNAPGYSPLEVEQRITFPIETAMGGLPNLVNTRSLSRYGLSQVTVVFKDGTDIYFARQLVNERVQRVKDILPVGIETAMGPVSTGLGEIYMYTVEAKEGAKNAEGKPYTPSDLRTAQDWIIKPQLRNVAGVNEVNTIGGFEKQFHVLPDPARLMAYRLSFRDVMTSLASNNANVGAGYIEKNGEQYLVRTPGQVANVEDIRQIVIGSRNGVPVRIMDVAEVKEGTDLRTGAATVSGKEVVLGTAMLLIGENGRTVAQRVAAKLEQIQKSLPEGISLRAIYDRTHLIDATIATVEKNLIEGALLVIAILFLILGNIKAAFATALVIPLSMLFTITGMFENKVSANLMSLGAIDFGIIIDGAVIIVENCLRLLAHEQQRRGRLLTREERFETIIAGAREVIKPSLFGTLIIAVVYLPVLTLTGVEGKMFTPMALTVLMALLGASLLSMTFVPAAVALMVTGKVSEKENWFMRLAHRTYVPLLDLAVRLRVVVAAAAVVLVIVSGYAATRMGGEFIPSLDEGDVAIQAMRIPGTSLTQSLEMQMALEKRLLAIPEVKEAFARTGTAEVATDPMPPSISDGYVMLKPRDQWPDPKKPKLEVMKEIETASEEVAGNLYELSQPIQLRFNELISGVRSDVGVKIFGDDLDVLAQVAAQVQAILQTIKGAADVKTEQVAGLPVLTVKLDRQALARFGINVADVQSLVEIAVGGKSAGLVFEGDRRFDLVVRLPDHLRTDVEAIKRLPIPLPPADGQAKATPAVFGNSPLAQMRYAPLAELAEISVSPGPNQISREDGKRRIVVSANVRGRDLGSFVGEAQQLVAGKVKLPAGYWIGWGGQFEQLVSATERLTIVVPIALLLIFLLLFISLGSAADALLVFSGVPLALTGGIFALLLRGIPLSISAGIGFIALSGVAVLNGLVIITFIERLRGDGRKIVDAVREGALTRLRPVLMTALVASLGFVPMALATGAGAEVQRPLATVVIGGIVSSTILTLLVLPALYILFRREASPAELAASSVPTKQGDH GT:EXON 1|1-1070:0| BL:SWS:NREP 1 BL:SWS:REP 1->1049|HELA_LEGPN|0.0|61.0|1032/1052| TM:NTM 11 TM:REGION 16->38| TM:REGION 356->378| TM:REGION 397->419| TM:REGION 444->466| TM:REGION 484->506| TM:REGION 530->552| TM:REGION 890->912| TM:REGION 920->942| TM:REGION 950->972| TM:REGION 993->1015| TM:REGION 1028->1049| SEG 351->362|allviailflil| SEG 400->414|aidfgiiidgaviiv| SEG 482->497|ltvlmallgasllsmt| SEG 527->550|vplldlavrlrvvvaaaavvlviv| SEG 691->708|ddldvlaqvaaqvqailq| SEG 900->917|iallliflllfislgsaa| BL:PDB:NREP 1 BL:PDB:REP 14->1047|2v50A|5e-43|22.6|976/1005| RP:PDB:NREP 1 RP:PDB:REP 5->1025|2dhhA|e-174|20.6|979/1022| RP:PFM:NREP 1 RP:PFM:REP 8->1048|PF00873|e-155|36.3|998/1014|ACR_tran| HM:PFM:NREP 1 HM:PFM:REP 6->1050|PF00873|0|38.6|1009/1021|ACR_tran| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00873|IPR001036| GO:PFM GO:0006810|"GO:transport"|PF00873|IPR001036| GO:PFM GO:0016020|"GO:membrane"|PF00873|IPR001036| RP:SCP:NREP 6 RP:SCP:REP 64->225|1mwkA2|5e-35|15.9|145/163|c.55.1.1| RP:SCP:REP 235->333|1iwgA2|8e-22|21.2|99/104|d.58.44.1| RP:SCP:REP 326->506|1iwgA7|1e-14|13.8|174/199|f.35.1.1| RP:SCP:REP 567->668|1iwgA3|6e-15|13.1|99/107|d.58.44.1| RP:SCP:REP 725->831|1iwgA6|5e-15|14.8|88/88|d.225.1.1| RP:SCP:REP 842->1054|1iwgA8|2e-22|22.5|213/222|f.35.1.1| HM:SCP:REP 42->127|1iwgA1|3e-22|40.7|86/0|d.58.44.1|1/2|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 154->333|1iwgA2|3.2e-19|37.9|95/0|d.58.44.1|2/2|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 299->508|1iwgA7|5.3e-31|31.8|198/200|f.35.1.1|1/2|Multidrug efflux transporter AcrB transmembrane domain| HM:SCP:REP 566->672|1iwgA3|0.00019|18.3|104/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 725->831|1iwgA5|3.5e-12|31.8|88/92|d.225.1.1|2/2|Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains| HM:SCP:REP 826->1056|1iwgA8|5.6e-55|41.0|222/223|f.35.1.1|2/2|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 4466 OP:NHOMOORG 670 OP:PATTERN -------------------------------------------------------------------- D9K-------------------------------------------11-1--111-11--11--1--1111------------44366FGHD-I24---23G4B8LBJ8C--------------342344533465111111--1-57555451122222534362D48A4-2-----2-----2111--11212222222222222221111112212112122------6311111111111111111111-----------------------------------------------------------------------6116-------1-1-122---------1-13122522213-1-----31E3BG77C11111BEOJSI9HLHIGD45574664547-NQGGPKML5A9-FAACAADAA98ABL6A96285655434888888888CB866961111111111--1-221121111111-111338936755BDHIGIBA7776CCFGAAAA7ADBFCGGN-5GHF7BA9BMFA7A6AGG9FAC89111111187B6BF74A2466648A5531694779B77AB9AE92A62111222222333333333553488B875JE9ICDB6DEFFEFEKLFFHHDJQKMG--1C84A------76677B67999788A77-6887789768797777777CDC773456545666666546455A64664761-877777765777--17343335989H9C651111121111111117779759222A8DEEECCEFCDFEB99BB111111111B5AAA666669CDCBGHDAEAA8AA54441-97BC56BB11111111-----------------------------1---111118C6 -------------1---------------------------------------------------------------------------------1--------------------------------------------------------------4----4-2-------5--------------K-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1041 STR:RPRED 97.3 SQ:SECSTR ####cHHHHHHcTTTTTHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHTTTHHHHcTTcccccccccccEEEETccEEccEEccTTccHHHHHHHHHHHHHHHGGGccHHHHHHcccEEEccccccEEEEEEEccccHEccccccHHHHHHHHHHTTHHHHHccccccEEEEEcccccccEEEEcHHHHHTTTccHHHHHHHHTTTccccccccccccccccccccccccccHHHHHccEEccTTTccEEHHHHEEEEccccccccEEEETTEEcccEEEEccccccHHHHHHHHHHHHTTTcccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccTTTTHHHHHHHHHHHHHHHHHGGGTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccccHcccHHHHHHHHTTTcHHHHTTHHHHHHTTTTTccccccTTTHHHHHHHHHHHHHHHHHHHHTTTTHHHHcTTTccccHHTTTTTTTTTHHHHHHHHHccccTTcTTTHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccTTccHHHHHHHHHHHHHTTccTTTEEEEEEEEEEccccEEE##EEEEEEEEEEccTTTcccGGGcHHHHHHHHHHHTcccTTcccEEEcccTTccccccccEEEEEEccccccTTHHHHHHHHHHHHHHccGGGccccEEcccccEEcccccccHHHHHHTTccHHHHHHHHHHHHHcccccEEEccccEEEccccccGGGcccTTTGGGcEEEcTGTTccGcccGGGGTTcHHHHHHEEEGGGcccccccEEccEEEEETTEEEEEEEEccccccHHHHHHHHHHHHHHHHTccTTcEEEEcHHHHHHHcccccHHHHHHHHHHHHHHHHHHHTTcccTTHHHHTTHHHHHHHHcTTccccccccTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTcccccTTTHHHHHHHTTHHHHHHHHHHHHHHHccTTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHTc####################### DISOP:02AL 1-1,430-434,674-676,1051-1071| PSIPRED cHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccEEcccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEcHHHHHHccccHHHHHHHHHHcccccccEEEccccEEEEEEEccccccHHHHHccEEEEcccEEEEEEEEEEEEEcccccEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccEEEEccEEEEEEcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccEEEEEEEEEEHHHcccccccHHHHHHHHHHHHHcccccEEEEcccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEcHHHHHHccccHHHHHHHHHHHHccEEEEEEEEccEEEEEEEEEcHHHHccHHHHHcccccccccccccccccccccccccccccEEEEEEEEEEEEEEcccEEEEEccEEEEEEEEEccccccHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc //