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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39433.1
DDBJ      :             acyl-CoA dehydrogenase-like
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  542/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:379 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->379 2pg0A PDBj 5e-72 39.3 %
:RPS:PDB   7->379 3d9dC PDBj 2e-83 22.0 %
:RPS:SCOP  4->228 1rx0A2  e.6.1.1 * 2e-64 33.0 %
:RPS:SCOP  229->377 1bucA1  a.29.3.1 * 6e-30 33.6 %
:HMM:SCOP  4->242 1w07A3 e.6.1.2 * 2.7e-79 45.2 %
:HMM:SCOP  229->377 1bucA1 a.29.3.1 * 6.1e-44 36.2 %
:RPS:PFM   10->120 PF02771 * Acyl-CoA_dh_N 1e-26 50.0 %
:RPS:PFM   124->174 PF02770 * Acyl-CoA_dh_M 1e-10 52.9 %
:RPS:PFM   229->377 PF00441 * Acyl-CoA_dh_1 1e-25 38.9 %
:HMM:PFM   229->377 PF00441 * Acyl-CoA_dh_1 6.8e-47 37.6 149/150  
:HMM:PFM   8->120 PF02771 * Acyl-CoA_dh_N 7.5e-32 44.6 112/113  
:HMM:PFM   124->175 PF02770 * Acyl-CoA_dh_M 1.4e-24 59.6 52/52  
:BLT:SWISS 7->377 ACADL_PIG 1e-62 35.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39433.1 GT:GENE ABE39433.1 GT:PRODUCT acyl-CoA dehydrogenase-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2457220..2458359 GB:FROM 2457220 GB:TO 2458359 GB:DIRECTION + GB:PRODUCT acyl-CoA dehydrogenase-like GB:PROTEIN_ID ABE39433.1 GB:DB_XREF GI:91683131 InterPro:IPR006090 InterPro:IPR006091 InterPro:IPR006092 InterPro:IPR013107 LENGTH 379 SQ:AASEQ MTNSLFYTADHIAFRDVMRRFVQKEIEPYATEWDEAGGFPRELYEKAAAIGLLGLGFPEEYGGTPTDQFMWIVATQELARAGAGGVSASLNSHSIGAPPIARAGSAALKARVLPEILSGKKISALAITEPSGGSDVANLRTTAKRDGDHYIVNGEKTFITSGMRADYITTAVRTGGDGPGGVSLLLIPGDTPGLTRTSLKKMGWWASDTATLHFDNCRVPAGNLLGQEGAGFMIIMLNFNSERLSMAAGCIAASRVCLDEASAYAKERVTFGKPLSKHQVIRHKLVDMAQRIAASQAMLELLAWRVQQGESPIAEICMLKNQATQTMAFCASEAVQIFGGAGFMRGVKVERIYREVKVNAIGGGTEEIMKDLASRQMGL GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 7->377|ACADL_PIG|1e-62|35.9|370/430| BL:PDB:NREP 1 BL:PDB:REP 10->379|2pg0A|5e-72|39.3|369/380| RP:PDB:NREP 1 RP:PDB:REP 7->379|3d9dC|2e-83|22.0|372/430| RP:PFM:NREP 3 RP:PFM:REP 10->120|PF02771|1e-26|50.0|110/113|Acyl-CoA_dh_N| RP:PFM:REP 124->174|PF02770|1e-10|52.9|51/53|Acyl-CoA_dh_M| RP:PFM:REP 229->377|PF00441|1e-25|38.9|149/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 229->377|PF00441|6.8e-47|37.6|149/150|Acyl-CoA_dh_1| HM:PFM:REP 8->120|PF02771|7.5e-32|44.6|112/113|Acyl-CoA_dh_N| HM:PFM:REP 124->175|PF02770|1.4e-24|59.6|52/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 4->228|1rx0A2|2e-64|33.0|224/231|e.6.1.1| RP:SCP:REP 229->377|1bucA1|6e-30|33.6|149/151|a.29.3.1| HM:SCP:REP 4->242|1w07A3|2.7e-79|45.2|239/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 229->377|1bucA1|6.1e-44|36.2|149/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 7069 OP:NHOMOORG 737 OP:PATTERN 44----6888A88977-243432D96661-7C-----------------------------5661--- 4556W3-5111846Y*nPP-Pm44muPPPPPWqq*qbq**4h8n1133-12-667668--HHW1FGUMJOF--------384B-----11111122---41445564565--------------------------67689---B3-1-1------------------12-------------88978--1D735555545555555553555545557BA9B11------53-111111-11111111---1--1------------------------------------------------------------------111315444444444423222221-6-315-13-B91597-17---11-3-71-SLLW-----41ZNQ555THURLAA9A9AA7978-44C44H4CABY15886656767789GAVBACE7677D9J11111111B----9A6-----------------------------1OMXN18VJDSDDFJREEAFFECCPIIJIIBKRDaaxsl35HIDC5EGFPGILRc33A----56-------112H884kGH-----------765-B-5--8888ED66----1-------1--------1-----32-8E485GA14444448A444494B7465---211-------3-4-11-2334244333-3323333323333332332111----1433144444342422412232122--111121111121---5222226665-KE23-----------1---IIIFICH79991OOPQBMEGJFDFFG869-------------2-----24-226655555555------12BB98AA----------1-------------------------1--11-1------ ----56A-941-AAADBBAD99AB8ACCC8A9A888AA9A9AABCC97789BBH9A8767775--------------------------8B7B8876555A99CCC-B75HEUBBEE88999D9IB5I9Q*D-EBQ6886C79HB49A77C74EADBBN9GH7IBD877CCEJBH2233Z43354646GA3544F9A99 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 379 STR:RPRED 100.0 SQ:SECSTR ccccccccHHHHHHHHHHHHHHHHTGGGHTTcccHHHHHHHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHTTccTHTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccTTccTTTcccccEEEEETTEEEEEEEEEccTTTccccEEEEEEEEcccTTcGEEEEEEcHHHHHTccGGccccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTcccTTTTHHHHHHHHHHc DISOP:02AL 1-1| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEcccccccccHHHEEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEccccccccccEEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcc //