[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39442.1
DDBJ      :             AMP-dependent synthetase and ligase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  794/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:512 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->502 1mdbA PDBj 8e-42 27.8 %
:RPS:PDB   5->508 1ba3A PDBj 5e-70 23.0 %
:RPS:SCOP  5->504 1md9A  e.23.1.1 * 2e-83 26.5 %
:HMM:SCOP  2->507 1pg4A_ e.23.1.1 * 2.6e-150 35.4 %
:RPS:PFM   28->432 PF00501 * AMP-binding 1e-55 35.4 %
:HMM:PFM   28->435 PF00501 * AMP-binding 2.5e-94 31.8 402/418  
:BLT:SWISS 19->502 LCFB_BACSU 1e-65 34.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39442.1 GT:GENE ABE39442.1 GT:PRODUCT AMP-dependent synthetase and ligase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2468939..2470477 GB:FROM 2468939 GB:TO 2470477 GB:DIRECTION + GB:PRODUCT AMP-dependent synthetase and ligase GB:PROTEIN_ID ABE39442.1 GB:DB_XREF GI:91683140 InterPro:IPR000873 LENGTH 512 SQ:AASEQ MLASEMIRRGAIYHGPKTAVMFGDQTMTFTEVDLLSNRIANVFIETFKLEVGSRVGMLLNNSIYTLPIDFGFVKSRLSRVPMNSRLSAAEQQQMLEGAGVQILIHGTDLTERAHELAQSMQLKLISVGNRADPDDLLQLAQAQSDAPPARTAEPDDVVITIFTSGTTGKLKAVEHTQASWAAMATNVLINMEIGEGDVMLHAASMIHASGCFIVPYWLRGGVAAVLPGFTPASYLDAVERWKPTALNLVPTMIGMLLDHPGIEQADFSSVKSIIYGASPMPRPTMHRALKLWGPRFAQYYGQSEAPIFITNLTKEDHVGPDAEQRLASCGRPSIDCEIKLVNEEGDDVAPGEAGEIALRTAFAMKGYYNAPELNAQMFLPGGWLRTRDVGRFDKDGYLYLVDRTSDMIVTGGYNVYPREVEDALAAHPAVREVVVVGLPDDKWGETVAAFVALRKEASAEDAELIAFARERLAGYKVPKQVQFIDEVPKSPVGKLLRRAVRDPFWQGRDRKI GT:EXON 1|1-512:0| BL:SWS:NREP 1 BL:SWS:REP 19->502|LCFB_BACSU|1e-65|34.0|473/513| BL:PDB:NREP 1 BL:PDB:REP 5->502|1mdbA|8e-42|27.8|486/536| RP:PDB:NREP 1 RP:PDB:REP 5->508|1ba3A|5e-70|23.0|496/540| RP:PFM:NREP 1 RP:PFM:REP 28->432|PF00501|1e-55|35.4|396/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 28->435|PF00501|2.5e-94|31.8|402/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 5->504|1md9A|2e-83|26.5|491/536|e.23.1.1| HM:SCP:REP 2->507|1pg4A_|2.6e-150|35.4|500/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 11085 OP:NHOMOORG 1041 OP:PATTERN 66-2--AIKJLLKJHC1174642KC665317C3251--333317666954433----1---356---3 48B6h774556E7Eg*mTT-SlAA*uTTTTTYtqyql***3gIh53373971E8F98D--VQM4fNnbRgA4233344-4A8H224317755-6221--429122E134311111111111111154456424454CDDEF333a8BFG6FGG22332333126336LCY812211113213185688--3D9QDDEDEHDGCEEFGJC88FFHKDEJBJDEC45444334V5366777777766677655552-2122121-1122222121333332---21211421221111111111111111111111--111---21---51111411111K277------71-92261CA3262--B31111-21A25LCCJ1111198cTh646ZTbSP34443343445-FEJFEODFAHL-A99E898A8DB8FN8C8BDM8C99CCJ44444444C3223EC9---------------11------------3GKgH-8OMCJIOQQRTQLNNHGFMVZZZYDWYEjalrb36IIGCEEHEYDMQaU33F1122B62222222458HAC5oMH76885B7777-9A94945588AB8jOA92221-332321141-11-1112227229B2797849568777789A8887A6A87AB--13B84------B5H7754777B7BB976-6777779799799776776769A9QR67566777777667667935455651-687878655575---523242666559R38333243133323113AAAAA4A9BAF5NQMNTRLMDHHJG9IFP5444454541455C788888758855644443332222--41332222---1-11141------------------------------------291 -1-1HO8-E73-77LRRRKXLNKhbbjJKEKFIHLHMKGLKKKHJIFCKTPUTWIIMHCEDFE3253253343343343343332222-JMCRGDB645586DJLJ3DDBeDODHDH96455A6NF5G5O*G2EEN8969F98H957542D72R8H9AQJKWGZHWGPGYMILSG5487g979C5OOOxNbW56JEFCE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 512 STR:RPRED 100.0 SQ:SECSTR HHHHHHHHHHHHHHHTcEEEEETccEEEHHHHHHHHHHHHHHHHHTHTccTTcEEEEEccccccTHHHHHHHHHHTcEEEEccTTccHHHHHHHHHHHcccEEEEcGGGHHHHHHHHHHcTTEEEEcccccccTTcEHccTTccTTTcccccccTTTcEEEEEEcccccccEEEEEHHHHHHHHHHHTTcccccTTcEEEEcccTTcHHHHHHHHHHHHHTcEEEEccccHHHHHHHHHHTTccEEEccHHHHHHHHHcccGGGcccTTccEEEcTTccccHHHHHHHHHTTccccccEEEcGGGccEEEEccTTccHHHHHHccTTcccEEcTTcEEEEEcTTcccccTTccEEEEEEcTTcccEETTcHHHHHHHccTTccEEEEEEEEEcTTccEEEccGGGccEEETTEEEcHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEEEcTTccccHHHHHHHHHTTccTTccTTEEEEcccccccTTccccHHHHHHHHHHHcTEEE DISOP:02AL 506-513| PSIPRED ccHHHHHHHHHHHccccEEEEEccEEEEHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHcccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHHHcccEEEcHHHHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHHHccEEEEEccccHHHHHHHcccHHHccccccccccccccccccccEEEEEcccccccccccEEEEEEEccHHHHHHcccHHHHHHHHcccccEEccEEEEEcccccEEEEEEcccEEEEccEEEcHHHHHHHHHHcccEEEEEEEEccccccccEEEEEEEEcccccccHHHHHHHHHHHccccccccEEEEEccccccccccccHHHHHHHHHHHccccc //