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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39449.1
DDBJ      :             Transketolase, central region
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  459/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:798 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->796 2g25A PDBj 8e-35 24.9 %
:RPS:PDB   29->787 1ay0A PDBj 1e-21 14.7 %
:RPS:SCOP  42->223 1ay0A1  c.36.1.10 * 3e-28 22.1 %
:RPS:SCOP  295->351 1ay0A1  c.36.1.10 * 4e-05 16.9 %
:RPS:SCOP  389->627 1l8aA2  c.36.1.6 * 1e-53 27.1 %
:RPS:SCOP  639->788 1l8aA3  c.48.1.1 * 1e-09 21.6 %
:HMM:SCOP  8->401 1l8aA1 c.36.1.10 * 1.9e-72 29.2 %
:HMM:SCOP  388->628 1l8aA2 c.36.1.6 * 3.2e-69 32.0 %
:HMM:SCOP  631->796 1l8aA3 c.48.1.1 * 1.2e-28 28.4 %
:RPS:PFM   43->231 PF00456 * Transketolase_N 5e-14 29.1 %
:HMM:PFM   42->224 PF00456 * Transketolase_N 2.2e-14 26.8 183/333  
:HMM:PFM   292->351 PF00456 * Transketolase_N 5.4e-05 18.3 60/333  
:BLT:SWISS 5->674 ODP1_RALEH 9e-37 26.7 %
:BLT:SWISS 737->785 TKTC_SPIOL 7e-05 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39449.1 GT:GENE ABE39449.1 GT:PRODUCT Transketolase, central region GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2477204..2479600 GB:FROM 2477204 GB:TO 2479600 GB:DIRECTION + GB:PRODUCT Transketolase, central region GB:PROTEIN_ID ABE39449.1 GB:DB_XREF GI:91683147 InterPro:IPR005475 LENGTH 798 SQ:AASEQ MPQTPQRLDLLNALSRKVLWLSTWMIHHANHIRPNADGLKVGGHQASSASLATIMSALYFSVLRPEDRVAVKPHASPIFHAIQYLFGRQSRARMENFRGFKGAQSYPSRTKDADDVDFSTGSVGLGVAQTLFSSLVQDYVKAHGWMKGRREGRMIALVGDAEMDEGNIFEALLEGWKHGLRNTWWVVDYNRQSLDAVVREGLWEKFETMFRNFGWDVVIVKYGRLMQQAFAEPGGEALKRWIDTCPNQMYAALCFQGGAAFRKRLQDEIGDQADVSRLIDARSDDELLALMSNLGGHDMASMVEAFESIDHDRPVCFIAYTIKGVGLPFQGHKDNHAGLMTPAQIETYRRAQNIRTGHEWDRFEGLTQDAAALDALLKAAPINAGGDRRLSAPAVEVPQHLSFKPAPEMSTQQGFGLILNELARSESELASRIVTASPDVTVSTNLGAWVNRRGLFARAEKADLFRSEKIPTTFNWDFSPKGQHIELGIAEMNLFILMSALGLSHTINGERLLPIATLYDPFIQRGLDALNYACYQDARFMVAATPSGITLAPEGGAHQSIATPLIGIAQDGLASFEPAFVDEVATIMRWGFEHMQRDDIEGGDAADGMRAGGSVYLRLSTRSIEQPQRMMTPALQKAIVDGAYWLREPGSNCELVIAYTGAVAPEAIEAVGLLGDSRRDVGLLAITSADRLHAGWTAARRLRRAHRGSRRASHIETLLAPLPRSCGIVTVLDGHPATLGWIGAVCGHRMEALGVEHFGQTGSIADLYRHYGIDANAIIDAAESLVAGAPVLHRKMAV GT:EXON 1|1-798:0| BL:SWS:NREP 2 BL:SWS:REP 5->674|ODP1_RALEH|9e-37|26.7|636/895| BL:SWS:REP 737->785|TKTC_SPIOL|7e-05|33.3|48/741| SEG 369->380|daaaldallkaa| SEG 602->613|ggdaadgmragg| SEG 698->712|aarrlrrahrgsrra| BL:PDB:NREP 1 BL:PDB:REP 2->796|2g25A|8e-35|24.9|754/831| RP:PDB:NREP 1 RP:PDB:REP 29->787|1ay0A|1e-21|14.7|640/678| RP:PFM:NREP 1 RP:PFM:REP 43->231|PF00456|5e-14|29.1|189/275|Transketolase_N| HM:PFM:NREP 2 HM:PFM:REP 42->224|PF00456|2.2e-14|26.8|183/333|Transketolase_N| HM:PFM:REP 292->351|PF00456|5.4e-05|18.3|60/333|Transketolase_N| RP:SCP:NREP 4 RP:SCP:REP 42->223|1ay0A1|3e-28|22.1|181/335|c.36.1.10| RP:SCP:REP 295->351|1ay0A1|4e-05|16.9|57/335|c.36.1.10| RP:SCP:REP 389->627|1l8aA2|1e-53|27.1|207/213|c.36.1.6| RP:SCP:REP 639->788|1l8aA3|1e-09|21.6|134/186|c.48.1.1| HM:SCP:REP 8->401|1l8aA1|1.9e-72|29.2|380/415|c.36.1.10|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 388->628|1l8aA2|3.2e-69|32.0|228/230|c.36.1.6|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 631->796|1l8aA3|1.2e-28|28.4|162/186|c.48.1.1|1/1|TK C-terminal domain-like| OP:NHOMO 603 OP:NHOMOORG 488 OP:PATTERN -------------------------------------1--1--------------1-----1-1---- 1211211111111111111-11112211111211111255-22211211111422111112241121232--------1------------------------1-1---1-----------------1--111---11111------------------------------------------11111-----------------------11--------------------------------------------------------------------------------------------------------------1-1-11111111212-1--1111--1-----1-111111-11111-1--1-111111-----11211--1--111----------1---3--2-1-1--------------11-1-11-1--1-11--------2-----1------------------------------1--1--2222222231222222112322221222312321211112122222231121-1111111111111111111---------1-------------1111----1--------------------------1111111121111111111111111111111-1111111111121111311111111111-11111111111111111121111111122222222222222221111111111111111111111111111111111111111111111111111111111111111111111122131111112121111111111111111111111112211111111111111---------------------------------------------1------1---- ------------------------------------------------------------------------------------------------------------2--21111-1---1--11-----------------1--1---1--1-----11-11----1--1111-------------------2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 794 STR:RPRED 99.5 SQ:SECSTR #cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHTTcTTccEEEccGGGHHHHHHHHHHTTccccHHHHTTTTcTTccccccccTTcTTcccccccTTHHHHHHHHHHHHHHHHHHHHccTTcccccEEEEEcHHHHHcHHHHHHHHHHHHTTcccEEEEEEEccHHHHHHHHTTcTTETGGGGGGGTcEEEEEETTcHHHHHHHEEccEETTEEGGGTccccHHHHHHHHTcEEEEEccTTTcHHHHHHHHTHHHHccHHHHHHHHHHTTcHHHHHHHHHTTcTTccEEEEEEccTTTTcTTTTcGGGTcccccHHHHHHHHHHTTccTTccccccHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHTTTcccTTGGGGcccccTTcccEEHHHHHHHHHHHHTTTcTTEEEEEcccHHHHTcccTTccEEccGGGccEETTccEEEccccHHHHHHHHHHHHHHHHHTcTTcEEEEEEEHHHHGGGHHHHHHHHHHTcccEEEEEcccGGGcTTcTTcccccHHHHHTcccccEEEccccHHHHHHHHHHHHHcccccEEEEEGGGccccc#ccEccccEEcccTTccHEEEcHHHHHTTccEEEEccccccccEEEEEcTTHHHHHHHHHHHHHHTTccEEEEEcccHHHHHTcccEEEEEEEEEEEcEccccHHHHHHHccTTccEEEEEccccccGGGGGTccHHHHEEEccccccccccHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHc## DISOP:02AL 1-1,704-709,795-796| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccHHHHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcHHHccHHHHHHHHHHHHcccccEEEEEEccccEEcccccccHHHHHHHHHHHccccEEEEcccccHHHHHHcccccHHHHHHHHcccccEEEEEcccccHHHcccHHHHcccHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEEEccccccccHHccHHHcccccHHHHHHHHHHcccccccHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHcccEEEccccccccccccHHHHHcccccccccccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHcHHccccEEEEEEHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHccccccccHHHcccccccEEEEEEccccccccccccHHHHHHHHccEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccccEEEEEEHHcHHHHHHHHHccccEEEEEEccccccccHHHHHHHHcccHHHHHHHHHHHHHccccccccccc //