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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39472.1
DDBJ      :             putative proteasome-type protease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.153.1
:248 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   4->204 3c92A PDBj 2e-14 17.0 %
:RPS:SCOP  2->223 1g0uK  d.153.1.4 * 9e-22 15.5 %
:HMM:SCOP  2->248 1rypI_ d.153.1.4 * 3.5e-34 25.5 %
:RPS:PFM   2->200 PF00227 * Proteasome 5e-14 34.1 %
:HMM:PFM   99->187 PF00227 * Proteasome 2.7e-07 22.1 86/190  
:BLT:SWISS 2->208 PSB7_SCHPO 1e-04 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39472.1 GT:GENE ABE39472.1 GT:PRODUCT putative proteasome-type protease GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2500149..2500895) GB:FROM 2500149 GB:TO 2500895 GB:DIRECTION - GB:PRODUCT putative proteasome-type protease GB:PROTEIN_ID ABE39472.1 GB:DB_XREF GI:91683170 InterPro:IPR001353 LENGTH 248 SQ:AASEQ MTYCCGVLVQDGLVMVADTRTNAGLDNISTFRKLHVFSRPGDRVMAIASAGNLSISQSVLSTLTEGLEDPETGARETLLDSPTMFQAAQRIGRVIRHVNATEAQALKAEEINYEVSFLFGGQIKGERMRLFMIYPAGNFIECTIDTPYLQIGEHKYGKPVLDRAITYDVELYEALKTSLISMDSTMRSNLGVGLPIDVLVVRTDVCDPDLHHRIEAGEPYFHDLRSRWSAALRAAHKNIPKPPYKNQA GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 2->208|PSB7_SCHPO|1e-04|29.0|183/267| SEG 224->235|lrsrwsaalraa| RP:PDB:NREP 1 RP:PDB:REP 4->204|3c92A|2e-14|17.0|182/224| RP:PFM:NREP 1 RP:PFM:REP 2->200|PF00227|5e-14|34.1|182/189|Proteasome| HM:PFM:NREP 1 HM:PFM:REP 99->187|PF00227|2.7e-07|22.1|86/190|Proteasome| GO:PFM:NREP 3 GO:PFM GO:0004298|"GO:threonine-type endopeptidase activity"|PF00227|IPR001353| GO:PFM GO:0005839|"GO:proteasome core complex"|PF00227|IPR001353| GO:PFM GO:0051603|"GO:proteolysis involved in cellular protein catabolic process"|PF00227|IPR001353| RP:SCP:NREP 1 RP:SCP:REP 2->223|1g0uK|9e-22|15.5|200/212|d.153.1.4| HM:SCP:REP 2->248|1rypI_|3.5e-34|25.5|220/0|d.153.1.4|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| OP:NHOMO 126 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- 1-1-------------------------------------------------------------------------------------------------------21--------------------------1-----------1-111111111------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111--111111----------1-11111111-11-------------11111111111111--------------11-------------------------------1111-----1-------------11--------11111-111111111111111-11-111-1----------11----------1-----------------------------------------------11-----1----------------------------111--------1----------------------------------11111-------------------1---------1------------------------111-----------------11111-1----11111-----1111----------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 194 STR:RPRED 78.2 SQ:SECSTR #cEEEEEEcccEEEEEEEEccccTTccGGGcccEEEE#EETETTEEEEEEEcHHHHHHHHHHHHHHHHHH####HHHHcccccHHHHHHHHHHHHHHTTHHHHHHTccccccccEEEEEEEEEETTEEEEEEEcTTccEEEc####cEEEEcTHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHHGGGccccEEEEEEEETTc############################################ DISOP:02AL 243-249| PSIPRED ccEEEEEEEcccEEEEEccccccccccHHEEEEEEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEccccEEEEEEcccccEEEEEccccEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccEEccEEccccccHHHHHHHHHHHHHHHHHHHHcccccccccc //