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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39473.1
DDBJ      :             transglutaminase-like
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  282/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.3.1
:274 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   118->225 3isrC PDBj 7e-10 35.3 %
:RPS:PDB   108->265 1e2tA PDBj 5e-26 14.0 %
:RPS:SCOP  108->263 1e2tA  d.3.1.5 * 8e-26 14.8 %
:HMM:SCOP  49->265 1f13A4 d.3.1.4 * 5.7e-45 31.6 %
:RPS:PFM   3->80 PF08379 * Bact_transglu_N 9e-07 38.5 %
:RPS:PFM   133->221 PF01841 * Transglut_core 6e-20 47.2 %
:HMM:PFM   115->221 PF01841 * Transglut_core 1.7e-28 30.8 107/113  
:HMM:PFM   2->81 PF08379 * Bact_transglu_N 5.7e-23 42.5 80/82  
:BLT:SWISS 2->265 Y2599_MYCBO 8e-20 29.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39473.1 GT:GENE ABE39473.1 GT:PRODUCT transglutaminase-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2501148..2501972) GB:FROM 2501148 GB:TO 2501972 GB:DIRECTION - GB:PRODUCT transglutaminase-like GB:PROTEIN_ID ABE39473.1 GB:DB_XREF GI:91683171 InterPro:IPR002931 LENGTH 274 SQ:AASEQ MRLRISHITTYRYEPAATGVIQVLRMTPGSHDGQYVADWQIDISSDAKLDMHHDAFGNITHVLTIGATEDLTITAEGLIETNDTGGVMRGTDERFPPQLFLRTTDLTELSPAMAAFTRETGGAEGDVISFLHALMSRMNDHMTFDGDPTHSGTTAAEAFALRRGVCQDYAHVFIACARAAGVPARFVSGHFLRADGEVHQQAGHAWAEAYVPSLGWVGFDPANGICSTDAHARVAIGLDYLGAAPVRGTRYGGGLETLTVAVRVDQAGRQFQSQ GT:EXON 1|1-274:0| BL:SWS:NREP 1 BL:SWS:REP 2->265|Y2599_MYCBO|8e-20|29.3|263/314| BL:PDB:NREP 1 BL:PDB:REP 118->225|3isrC|7e-10|35.3|102/281| RP:PDB:NREP 1 RP:PDB:REP 108->265|1e2tA|5e-26|14.0|157/274| RP:PFM:NREP 2 RP:PFM:REP 3->80|PF08379|9e-07|38.5|78/82|Bact_transglu_N| RP:PFM:REP 133->221|PF01841|6e-20|47.2|89/109|Transglut_core| HM:PFM:NREP 2 HM:PFM:REP 115->221|PF01841|1.7e-28|30.8|107/113|Transglut_core| HM:PFM:REP 2->81|PF08379|5.7e-23|42.5|80/82|Bact_transglu_N| RP:SCP:NREP 1 RP:SCP:REP 108->263|1e2tA|8e-26|14.8|155/274|d.3.1.5| HM:SCP:REP 49->265|1f13A4|5.7e-45|31.6|206/325|d.3.1.4|1/1|Cysteine proteinases| OP:NHOMO 600 OP:NHOMOORG 285 OP:PATTERN ------1-------11---------------------------------------------------- 1111----------32233-3322333333333333-122-212--1--11-111--1------1------1---111---1----------------------1114-----------------1-111-1111111111---1-1-2311211111111-1111-----1--1111--1-1212-----1-----------------------------1----------1----------------------------------------------------------------------------------------------------11-1--------------1-----------1----------13511------33533---44553----------1-44344346-31-43354435542254411431343321-11111111-22-3224------------------------------2152-----13333333333333533333-33352432-3111321---4413--23-114-1-----------24--31-----1------1-21---------5--2------------------------11----23------211---------11---1------2--------1----------------------------------11111-------------------1---------1------------------------114-3---------------11111-2---322232-4333111114342-2-2212--------------------------------2-22--------------------------------------------------11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 65.0 SQ:SECSTR ###############################################################################################cccGGGcccGGGcccHHHHHHHHHTTccccccHHHHHHHHHHHHHHccEEcHHHHTTHHHHHTTTcccccHHHHHHHHHHHHHHTTccEEEEEEEEcTTcccccccccEEEEEEEETTcEEEEEcccccTTcccccEEccccccEEETTEEEEEEccTTcEEEEEEccccEETTEEEE# DISOP:02AL 271-275| PSIPRED cEEEEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEEEEEEEcccccccccccccccHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHccEEEcccccccccHHHHHHccccccccHHHHHHHHHHHccccEEEEEEEEEcccccccccccEEEEEEEEccccEEEEcccccccccccEEEEEEEccccccccEEEEEEEccccEEEEEEEEEEcccccccc //