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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39486.1
DDBJ      :             HI0933-like protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  403/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.3.1c.50.1
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->388 2i0zA PDBj 6e-27 27.3 %
:RPS:PDB   8->388 1d4cB PDBj 7e-19 17.1 %
:RPS:SCOP  8->244 2gqfA1  c.3.1.8 * 5e-36 24.4 %
:RPS:SCOP  320->362 2afcA1  c.50.1.2 * 1e-04 4.7 %
:RPS:SCOP  341->388 2gqfA1  c.3.1.8 * 8e-05 30.6 %
:HMM:SCOP  1->408 1e39A2 c.3.1.4 * 2.4e-26 31.7 %
:RPS:PFM   8->388 PF03486 * HI0933_like 3e-41 39.4 %
:HMM:PFM   8->402 PF03486 * HI0933_like 1.3e-116 37.4 393/409  
:BLT:SWISS 1->36 THI4_PYRAE 4e-05 47.2 %
:BLT:SWISS 11->388 Y933_HAEIN 2e-13 24.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39486.1 GT:GENE ABE39486.1 GT:PRODUCT HI0933-like protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2512726..2513970 GB:FROM 2512726 GB:TO 2513970 GB:DIRECTION + GB:PRODUCT HI0933-like protein GB:PROTEIN_ID ABE39486.1 GB:DB_XREF GI:91683184 InterPro:IPR000103 InterPro:IPR000205 InterPro:IPR001100 InterPro:IPR003042 InterPro:IPR004792 InterPro:IPR006076 InterPro:IPR013027 LENGTH 414 SQ:AASEQ MTDASTIDVAVIGAGPAGLMAAEVAAKGGARVTVFDGMSSAARKFLLAGRGGLNLTHSEPLADVLERYGAAQQRLRPAIEAFPPDALRGWAEELGQPTFVGSSGRVFPVTMKASPLLRAWLRRLDAQGVQLKLRHRWTGWDDNGRLLFDTFDGPRAIAARATVLALGGASWPKLGSDGGFVDLLAAKGIAIAPLKPANCGFTVDWSELFAEKYQGTPLKNIALSCGGRAIRGEAIVTRTGLEGGAVYALSAGLRDAILADGEATLMIALRPDLSADELTSRLTKPKGKQSLSTFLRKAAGLPPAGIGLLQEAAHRQGRSLASLPPAECAALINAVPVRLTGIAPIARAISTAGGIAFAELDDTSMLRKLPGVFAAGEMLDWEAPTGGYLLTACFATGAAAGRGALAWLGRKSTD GT:EXON 1|1-414:0| BL:SWS:NREP 2 BL:SWS:REP 1->36|THI4_PYRAE|4e-05|47.2|36/261| BL:SWS:REP 11->388|Y933_HAEIN|2e-13|24.4|365/401| SEG 389->409|lltacfatgaaagrgalawlg| BL:PDB:NREP 1 BL:PDB:REP 8->388|2i0zA|6e-27|27.3|381/416| RP:PDB:NREP 1 RP:PDB:REP 8->388|1d4cB|7e-19|17.1|375/566| RP:PFM:NREP 1 RP:PFM:REP 8->388|PF03486|3e-41|39.4|371/394|HI0933_like| HM:PFM:NREP 1 HM:PFM:REP 8->402|PF03486|1.3e-116|37.4|393/409|HI0933_like| RP:SCP:NREP 3 RP:SCP:REP 8->244|2gqfA1|5e-36|24.4|225/253|c.3.1.8| RP:SCP:REP 320->362|2afcA1|1e-04|4.7|43/153|c.50.1.2| RP:SCP:REP 341->388|2gqfA1|8e-05|30.6|48/253|c.3.1.8| HM:SCP:REP 1->408|1e39A2|2.4e-26|31.7|221/0|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 496 OP:NHOMOORG 414 OP:PATTERN --------------------------------11---------11111-------------------- 1-------------------------------------------------------------------------------------------------------1-11-----------------111111-1111-----221---1-------11--111-1-1---1-11--111-1--1--------111111111111111111111111111111111111111111111111111111111111111----------------------111111111111111111111111111111111111111-1111111-221211111112121222133321111-111-2222-1--1-111---11-12111-----111111111111122222122222-11111111--1-2222222222221111211111112111111111112211221------------------------------1-1--111-1-------------11--------11111--1111111111121-1111-1-2----------1111----1111--111---------1-------1-1-------------------22-13----1--1-1---111111-1111111--1-----11--------1--1--------------------------------11-1-----11111111111111111------------------------1-----------112----11---------1111111--12122222222222122222-----------11-----------1122222222--------11--------------1-------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------11--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 388 STR:RPRED 93.7 SQ:SECSTR cccccEccEEEEcccHHHHHHHHHHHHHTccEEEEcccccccTTGGGcccccEEccccHHHHHTTccccHHHHHHHHHHHHHHHTTccccEEEccTTcccccEEEccccccHHHHHHHHHHHHHHHTTcEEEccEEEEEEcccccEEEETTTEEEEEEccEEEEcccccTTcHHHHHHHcGGGTTcEEcccTTccEEcTTcEEEEEEEcTTTcccccTHHHHTTcEEEcccccccccTTccHHHHHHHHHTcTTccEEEEEEHHHHHHcTHHHHHHHTTccEEEccHHHHHHHHTccHHHHHHHHHHHHHHHHHHHTcHTccccccccccccccccccEEEEEEEEEEEEEccEETTcEEEcTTTccEEEEEEEccTTccTTcccTTH########################## DISOP:02AL 1-4,282-292,412-415| PSIPRED ccccccccEEEEcccHHHHHHHHHHHHcccEEEEEEccccccHHHHccccccEEEEccccHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHcccEEEEccccEEEcccccHHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEcccccEEEEcEEEEccccccccccccccHHHHHHHHcccEEEcccccccccccccHHHHHHHcccccccccEEEEccEEEcccEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHcccEEEEccccHHHHHHHcccccHHHHcHHHHHHccccEEEEEEEEEccccccHHHHHHHHHccccccccHHHcccccccc //