[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39500.1
DDBJ      :             Alcohol dehydrogenase, zinc-binding
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  292/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1e.60.1
:341 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->334 1v3uB PDBj 8e-62 45.3 %
:RPS:PDB   1->336 2c0cA PDBj 4e-41 20.7 %
:RPS:SCOP  5->170 1vj1A1  b.35.1.2 * 6e-24 35.7 %
:RPS:SCOP  164->318 1zjcA1  e.60.1.1 * 1e-05 11.0 %
:HMM:SCOP  1->147 1v3uA1 b.35.1.2 * 3.5e-43 45.7 %
:HMM:SCOP  119->302 1vj1A2 c.2.1.1 * 3e-50 33.3 %
:HMM:SCOP  289->336 1v3uA1 b.35.1.2 * 2e-06 39.6 %
:HMM:PFM   157->294 PF00107 * ADH_zinc_N 8.5e-23 31.0 126/130  
:BLT:SWISS 3->339 YNCB_ECOLI e-106 60.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39500.1 GT:GENE ABE39500.1 GT:PRODUCT Alcohol dehydrogenase, zinc-binding GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2529876..2530901 GB:FROM 2529876 GB:TO 2530901 GB:DIRECTION + GB:PRODUCT Alcohol dehydrogenase, zinc-binding GB:PROTEIN_ID ABE39500.1 GB:DB_XREF GI:91683198 InterPro:IPR013149 LENGTH 341 SQ:AASEQ MSKGQRIVLASRPTGEPTAANFRLEEFDVPAPGEGQVLLRTIWLSLDPYMRGRMSDGPSYAQPVPVGGVMEGGTVCEVLDSNSPGFAKGDIVLAHAGWQTHALADPKPLRKIDPSLGPISTAVGVLGMPGMTAYTGLLDIGQPKEGETVVVAAASGAVGSAVGQIAKIKGARAVGIAGGKAKCDYVKNELGFDDCLDHRDPDLAAKLKAACPKGIDVYFENVGGEVFEAVFPLLNAFARIPVCGLIAQYNAFEAPPTPKWAGAMMRHVLTKRLTIRGFIVSDFAGRRQEFLRDMSEWVRDGKVKYREFVTEGVESAPSAFIGLLKGANFGKQLVRVGPDRA GT:EXON 1|1-341:0| BL:SWS:NREP 1 BL:SWS:REP 3->339|YNCB_ECOLI|e-106|60.2|337/353| SEG 149->163|vvvaaasgavgsavg| BL:PDB:NREP 1 BL:PDB:REP 1->334|1v3uB|8e-62|45.3|322/332| RP:PDB:NREP 1 RP:PDB:REP 1->336|2c0cA|4e-41|20.7|333/353| HM:PFM:NREP 1 HM:PFM:REP 157->294|PF00107|8.5e-23|31.0|126/130|ADH_zinc_N| RP:SCP:NREP 2 RP:SCP:REP 5->170|1vj1A1|6e-24|35.7|154/166|b.35.1.2| RP:SCP:REP 164->318|1zjcA1|1e-05|11.0|154/413|e.60.1.1| HM:SCP:REP 1->147|1v3uA1|3.5e-43|45.7|140/148|b.35.1.2|1/2|GroES-like| HM:SCP:REP 119->302|1vj1A2|3e-50|33.3|183/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 289->336|1v3uA1|2e-06|39.6|48/148|b.35.1.2|2/2|GroES-like| OP:NHOMO 1011 OP:NHOMOORG 471 OP:PATTERN ------------------------1111--1------------------------------------- --1-3--------1-11----1--3------111112274-1-11-11112-211111--21112113142--------------------------------1---------------------------------------------------------------224---------------------1-1-----------------1111----1--11---------11111111111111121111--------------------------------------------------------------------------------------------------------------------------22112------1221---21222----------1-22122223-25-1--111112221-11621--1-11--1--------1-----21-------------------------------321------3222232333333213333135211322--111-3111112321--2----1----------1-----1---------------------11-121-----------------------------11-1--113121111112-111-1-11-11-------------11--111111-1---11-11111--1-11-1111111111121--1111111111-111111-111111--1--------------1-----------211-------------------1---21--23231222-21111111-------------1-----111111111111111------------------------------------------------------------1-- ----331-21----3233342224543111211221211111111122134475223222221221---2-13-21111112222122-8F3326111114-2362-326M453523333234246372AN4-6343332433512312332243342565513324-4731222-1--7---1227EN4D21167755 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 100.0 SQ:SECSTR HccEEEEEEEccccccHHHHEEEEEEEEcccccTTEEEEEEEEEEccTTHHHHHTTTTcTTccccEEcccEEEEEEEEEcTTGGGTccTTcEEEEEcccccccEEEEEGGGcEEEcccccHHHHTTTTHHHHHHHHHHHHTcccTTcEEEETTTTcTTHHHHHHHHHHTTcEEEEEEccHHHHHHHHHHTTccEEEETTTccHHHHHHHHcTTcEEEEEEcccTHHHHHHHHHEEEEEEEEEcccGGGTTcTcccccccccTTHHHHHHHHTcEEEEccGGGcGGGHHHHHHHHHHHHHTTcccccEEccTcTTHHHHHHHHHHTTccccEEEEEcccccG DISOP:02AL 1-2,339-342| PSIPRED ccccEEEEEEEccccccccccEEEEEEccccccccEEEEEEEEEEccHHHHHHHcccccccccccccccEEEEEEEEEEcccccccccccEEEEEccccEEEEEcHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEcccccHHHHHHHHccccEEEEEEcccHHHHHHHHHHcccccEEEEEcccccccccccccccccccccHHHHHHcccEEEEEEEcccHHHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHccccccEEEEEEccccc //