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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39584.1
DDBJ      :             coproporphyrinogen III oxidase, anaerobic
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  827/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:480 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   90->329 1oltA PDBj 9e-21 27.5 %
:RPS:PDB   64->384 3cixA PDBj 6e-20 14.0 %
:RPS:SCOP  59->415 1oltA  c.1.28.2 * 4e-59 24.8 %
:HMM:SCOP  42->465 1oltA_ c.1.28.2 * 7.6e-78 28.8 %
:RPS:PFM   96->251 PF04055 * Radical_SAM 9e-09 32.4 %
:RPS:PFM   281->322 PF02100 * ODC_AZ 1e-04 47.6 %
:HMM:PFM   91->256 PF04055 * Radical_SAM 2e-14 28.2 156/166  
:HMM:PFM   343->451 PF06969 * HemN_C 4.9e-12 25.7 109/118  
:BLT:SWISS 90->406 HEMN_MYCTU 1e-26 32.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39584.1 GT:GENE ABE39584.1 GT:PRODUCT coproporphyrinogen III oxidase, anaerobic GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2626562..2628004 GB:FROM 2626562 GB:TO 2628004 GB:DIRECTION + GB:PRODUCT coproporphyrinogen III oxidase, anaerobic GB:PROTEIN_ID ABE39584.1 GB:DB_XREF GI:91683282 InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR010723 LENGTH 480 SQ:AASEQ MTMANARMSGGSAHGAHDHHGAQGRHPAQAAALQVSDYFVRIGCDPLTEAFERRSFSPPWRGSRPVDTEDVDAVFKRIFATPRQETAVAYVHVPFCQTRCLFCGFFQNAWRPEAGAAYVDDLLAELAIRSTTALVSSAPIDAVYIGGGTPSALAADDLVRLVEGLRHHLPLTSDCEITLEGRAFGFDLAKAAKVADVGVTRMSIGVQTFSTEVRRRLGRKLSGPEVQSFLTDLVALGRTAVVCDLIYGLPGHDGAEWCRDIEIVDQIGIDGVTLYALNTFPGGPLASAIEKGKLSPPATPGEQARAYADAVERLAALGWLQVSQSHLVRSVREFNRYNAAIKRGVTCLPFGAGAGGQAHGYRWRNVIEIAQRREMIAQHREPVEALALVPPDHAAHAMIAAGLEAGRLDLVAIEALRPGFRVAVAPLLANWAAAGLGELSGDGFKPNHAGAFWIGNLTSGLSAGLQSATQAESNACCGSV GT:EXON 1|1-480:0| BL:SWS:NREP 1 BL:SWS:REP 90->406|HEMN_MYCTU|1e-26|32.0|309/375| SEG 10->26|ggsahgahdhhgaqgrh| SEG 423->439|avapllanwaaaglgel| BL:PDB:NREP 1 BL:PDB:REP 90->329|1oltA|9e-21|27.5|236/434| RP:PDB:NREP 1 RP:PDB:REP 64->384|3cixA|6e-20|14.0|299/345| RP:PFM:NREP 2 RP:PFM:REP 96->251|PF04055|9e-09|32.4|145/164|Radical_SAM| RP:PFM:REP 281->322|PF02100|1e-04|47.6|42/155|ODC_AZ| HM:PFM:NREP 2 HM:PFM:REP 91->256|PF04055|2e-14|28.2|156/166|Radical_SAM| HM:PFM:REP 343->451|PF06969|4.9e-12|25.7|109/118|HemN_C| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| GO:PFM GO:0004857|"GO:enzyme inhibitor activity"|PF02100|IPR002993| GO:PFM GO:0008073|"GO:ornithine decarboxylase inhibitor activity"|PF02100|IPR002993| RP:SCP:NREP 1 RP:SCP:REP 59->415|1oltA|4e-59|24.8|351/436|c.1.28.2| HM:SCP:REP 42->465|1oltA_|7.6e-78|28.8|417/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 1529 OP:NHOMOORG 891 OP:PATTERN -----1-------------------------------------------------------------- 1111211111111111111-11--1111111111111111121111111111111111--1111212111211111111322-22222221111111--22222222212222222222222221222222222222221111121222222111111111112221322111111111111111111111112111111112111111222222111111211111111121211111111111111111111---11---------111-----1111111111111111111111111111111111111111111111122223111111122231221222242222222-222211111111111322-2222212112124221123433333233333332-1111122225111222433211222212233233323222222222222211232------------11111111-1111-----1212222212222222233332222333334222222222222222223322223222122232222222111222211111111111111111111112222231112243322222212222222223222223322222222233333234333333543351-213321--11132223222333233322-3222333232333222223222332222233233223323233222222221-333233333333--1211111111122212333222211-122222211211222222222222223222322211111111123333333333333322121211111111-12-222222--------111-----------1-------------1111112111121 ------1-----1-1----------------------------------------------------------------------------------------11--12-212111---11-1-1-1112A1-112--1-11111-1---11-11-113----111-------311-11C111111111-11-12---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 353 STR:RPRED 73.5 SQ:SECSTR ####################################cccccEEEEEETTcHHHHHHcccGGGGHcccHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccTTcTTcTTccccccccccHHHHHHHHHHEccGHHHHHTTccEEEEEEcccGGGTTHHHHHHHHHHHTTccEEHccEEEEEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEEEccEEccTTccHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTTTcGGGccccccHHHHHHHHHHHHHHcTTcccccHHHHHHcTTHHTTTccEEccccccTTTGGGcccccccTTTTccTTcHHHHHHHHHHHTTcEEcHHHHH########################################################################################### DISOP:02AL 1-31| PSIPRED ccccccccccccccccccccccccccHHHcccccccccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccEEEEccHHcccccHHHHccccccccccEEEEccccccEEccEEEEEcccHHHHHHHHHccccccHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //