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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39590.1
DDBJ      :             Biopolymer transport protein ExbD/TolR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  450/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->138 2pfuA PDBj 3e-22 48.9 %
:RPS:PFM   18->136 PF02472 * ExbD 5e-16 40.3 %
:HMM:PFM   19->137 PF02472 * ExbD 7.4e-28 31.9 119/130  
:BLT:SWISS 12->140 EXBD_PSEPU 1e-43 67.4 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39590.1 GT:GENE ABE39590.1 GT:PRODUCT Biopolymer transport protein ExbD/TolR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2633043..2633480 GB:FROM 2633043 GB:TO 2633480 GB:DIRECTION + GB:PRODUCT Biopolymer transport protein ExbD/TolR GB:PROTEIN_ID ABE39590.1 GB:DB_XREF GI:91683288 InterPro:IPR003400 LENGTH 145 SQ:AASEQ MAVKLGAKRAGGDDDLAETHEINVTPFIDVMLVLLIIFMVAAPLATVDLGVDLPTSTAEPQARPDKPIFISLKPDLSLALGEQVIAREAVGASLGAATNGNKDERIFLRADKAVSYGELMAVMNLLRDAGYLKVALVGLDGRSTP GT:EXON 1|1-145:0| BL:SWS:NREP 1 BL:SWS:REP 12->140|EXBD_PSEPU|1e-43|67.4|129/142| TM:NTM 1 TM:REGION 28->50| BL:PDB:NREP 1 BL:PDB:REP 47->138|2pfuA|3e-22|48.9|92/99| RP:PFM:NREP 1 RP:PFM:REP 18->136|PF02472|5e-16|40.3|119/127|ExbD| HM:PFM:NREP 1 HM:PFM:REP 19->137|PF02472|7.4e-28|31.9|119/130|ExbD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02472|IPR003400| GO:PFM GO:0006810|"GO:transport"|PF02472|IPR003400| GO:PFM GO:0016020|"GO:membrane"|PF02472|IPR003400| OP:NHOMO 708 OP:NHOMOORG 451 OP:PATTERN -------------------------------------------------------------------- 121--------------------------------------------------------------------------------------------------------------------------111111111-1------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-433322222433444526444422222222222-22422232122-122211211122221111122222111333333331112212211--------111111111111111----11311112222234452522223323222212636111111111433331333313413422-11111111111232111111113112211111111112121121-111211221111111111111-1--11122211-111-11111111111111111111--11112------1111-111111111111-1111111111111111111111221111111111111111111111111111-111111111111---1-----111111111111--------1---111113423233111122232222224331111111-1-111-1111111111332232222211-1111-111111------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 92 STR:RPRED 63.4 SQ:SECSTR ##############################################ccccccccccccccccccccccEEEEETTTEEEETTEEEccccHHHHHHHHccccccccEEEEEcTTccHHHHHHHHHHHHHTccccEEcTT####### DISOP:02AL 1-21,52-69,136-138,140-146| PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHccccccccccccccccccccccEEEEEcccccEEEccEEccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccccccc //