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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39607.1
DDBJ      :             thioredoxin
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  712/915 : Eukaryota  32/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:143 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->139 2pptB PDBj 3e-23 45.6 %
:RPS:PDB   41->142 2eiqA PDBj 2e-19 28.4 %
:RPS:SCOP  42->142 1qgvA  c.47.1.8 * 2e-18 11.9 %
:HMM:SCOP  37->144 2trcP_ c.47.1.6 * 1.7e-33 34.9 %
:RPS:PFM   40->139 PF00085 * Thioredoxin 4e-15 31.0 %
:HMM:PFM   41->140 PF00085 * Thioredoxin 1.2e-29 32.0 100/104  
:HMM:PFM   5->35 PF11331 * DUF3133 0.00041 25.8 31/46  
:BLT:SWISS 3->140 THIO2_SHIFL 8e-24 35.0 %
:PROS 59->77|PS00194|THIOREDOXIN_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39607.1 GT:GENE ABE39607.1 GT:PRODUCT thioredoxin GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2652083..2652514 GB:FROM 2652083 GB:TO 2652514 GB:DIRECTION + GB:PRODUCT thioredoxin GB:PROTEIN_ID ABE39607.1 GB:DB_XREF GI:91683305 InterPro:IPR006662 InterPro:IPR006663 LENGTH 143 SQ:AASEQ MDMHIVCGKCAATNRVPAGRPAATAKCGKCRQVLFAGHSAEVDGQTFDRHIGHDTIPVLVDVWAPWCGPCRAMAPAYEAAARELEPDVRLLKLNSDVEQSVATRLRINSIPTMILFQGGREIGRQSGAMSAHQIVQWVRQLVP GT:EXON 1|1-143:0| BL:SWS:NREP 1 BL:SWS:REP 3->140|THIO2_SHIFL|8e-24|35.0|137/139| PROS 59->77|PS00194|THIOREDOXIN_1|PDOC00172| SEG 72->81|amapayeaaa| BL:PDB:NREP 1 BL:PDB:REP 3->139|2pptB|3e-23|45.6|136/143| RP:PDB:NREP 1 RP:PDB:REP 41->142|2eiqA|2e-19|28.4|102/107| RP:PFM:NREP 1 RP:PFM:REP 40->139|PF00085|4e-15|31.0|100/103|Thioredoxin| HM:PFM:NREP 2 HM:PFM:REP 41->140|PF00085|1.2e-29|32.0|100/104|Thioredoxin| HM:PFM:REP 5->35|PF11331|0.00041|25.8|31/46|DUF3133| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 42->142|1qgvA|2e-18|11.9|101/130|c.47.1.8| HM:SCP:REP 37->144|2trcP_|1.7e-33|34.9|106/0|c.47.1.6|1/1|Thioredoxin-like| OP:NHOMO 1374 OP:NHOMOORG 754 OP:PATTERN ------1--------11------2--------------------1--111----------------22 1122322211122221123-2411112222215333-253211121-12111232-3---1221122212--------11-1311211222112--1---1-221112-211111111-11111133-332331334223311231423522222331222222231334411111111111122222--12------------------1-------111-111------211---------------------1----2--1--22----1-1-----------1--1--11111111-----------------------1-11-11111111111-111---111--211-111121111222211--1-11222511111122242123233222222222223-133122223421222222222222221322222222213111111112111123111-11111111111111111111111-11-12221222222222344111233222222232222222113223234332332211142112211111111122321222112222111111221-11-133334622211111111111-111111121133442211313221222222121222212112111-11214-1----22222222222222122-2222222222222222222222331112222222222222222222222222-222222222222--11111111111314221111111111111112122212112312222222333333211222222222232223222222222222334332221222134-221111---------11---1---------------1---------------121 ------1----------------------------------------------------------------------------------------1----1--11--13-------------------------------------------------1---1----2----11-2432Q22233964D-54121---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 143 STR:RPRED 100.0 SQ:SECSTR cGGGccTTccccccccccccccccccccccccccccTTEEEccGGGccccccccccEEEEEEEcTTcHHHHHHHHHHHHHHHHTTTTcEEEEEETTTcTTHHHHTTcccccEEEEEETTEEEEEEEccccHHHHHHHHHHHcc DISOP:02AL 1-1,18-33| PSIPRED ccEEEEccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHcccEEEEEEEccccHHHHHHcccccccEEEEEEccEEEEEEEccccHHHHHHHHHHHcc //