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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39633.1
DDBJ      :             phytochrome sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  823/915 : Eukaryota  106/199 : Viruses  1/175   --->[See Alignment]
a.30.2d.110.2d.110.3d.122.1
:776 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->334 2oolA PDBj e-120 69.1 %
:BLT:PDB   547->760 3dgeA PDBj 5e-16 31.1 %
:RPS:PDB   47->519 3c2wD PDBj 5e-53 30.8 %
:RPS:PDB   491->774 3d2rB PDBj 3e-31 14.7 %
:RPS:SCOP  12->137 1ztuA2  d.110.3.9 * 2e-27 33.1 %
:RPS:SCOP  167->327 2k2nA1  d.110.2.1 * 4e-50 32.3 %
:RPS:SCOP  354->519 3c2wA2  d.110.2.4 * 2e-34 32.9 %
:RPS:SCOP  524->603 2c2aA1  a.30.2.1 * 1e-10 25.0 %
:RPS:SCOP  613->766 1b3qA3  d.122.1.3 * 5e-26 15.6 %
:HMM:SCOP  162->340 1mc0A2 d.110.2.1 * 4.4e-10 17.8 %
:HMM:SCOP  520->608 2c2aA1 a.30.2.1 * 2.7e-13 29.2 %
:HMM:SCOP  604->764 1gkzA2 d.122.1.4 * 5.6e-40 40.8 %
:RPS:PFM   29->136 PF08446 * PAS_2 1e-22 49.1 %
:RPS:PFM   168->319 PF01590 * GAF 1e-05 32.0 %
:RPS:PFM   361->511 PF00360 * Phytochrome 1e-26 38.0 %
:RPS:PFM   539->603 PF00512 * HisKA 7e-06 38.5 %
:RPS:PFM   650->766 PF02518 * HATPase_c 3e-19 42.5 %
:HMM:PFM   342->521 PF00360 * Phytochrome 2.2e-60 42.2 180/183  
:HMM:PFM   29->136 PF08446 * PAS_2 1e-27 35.8 106/108  
:HMM:PFM   648->766 PF02518 * HATPase_c 4.5e-26 32.4 108/111  
:HMM:PFM   166->325 PF01590 * GAF 6.6e-20 24.3 148/154  
:HMM:PFM   540->604 PF00512 * HisKA 1.4e-11 36.7 60/68  
:BLT:SWISS 25->764 PHYA_ANASP e-150 39.1 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39633.1 GT:GENE ABE39633.1 GT:PRODUCT phytochrome sensor signal transduction histidine kinase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2676970..2679300 GB:FROM 2676970 GB:TO 2679300 GB:DIRECTION + GB:PRODUCT phytochrome sensor signal transduction histidine kinase GB:PROTEIN_ID ABE39633.1 GB:DB_XREF GI:91683331 InterPro:IPR001294 InterPro:IPR003018 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 LENGTH 776 SQ:AASEQ MNERRTPAASDPTAFIPGDDVLAADLTECDREPIHIPGSIQPHGMLIALAEPELRPVSVSANIQAMIGIPPETALAEPLSAYMTAESFALLRAALSDDDVASTNPIRLEFLTKSAPIAFNGILHRHDGLCILELEPRGATESSSEFFRSVRAAIRRLQKASSVLMACDIAAREVRRITGFDRIKIYRFAADWSGQVIAEDRVDSIPSLLDFHFPASDIPAQSRALYTSNTIRIIPDVAYRPSPLLPDRNPVTGGPIDLSYAVLRSVSPVHVEYMVNMAVYGAMSVSIVREGRLWGMISCHNTLPRFVPFEIRQACELIAQVLTWQISVLEEAEIVQHSVQVRAIQNKLLHQFGDEQNLHEGLTRIGDEMLALMSAFGFALCGFDGITSFGRTPSPAQLQDLANWIARNQPSGAFETDRLSTLYADASSYREIASGVLAIPLGRASTSLLLWFRPEVAQTVTWGGDPHKPVQIGPRGRRLQTRASFDAWREEVRGRAIPWRSHEIAAAIEIRDLVVDVILGKAEQLERANRELSRSNDELESFAYVAAHDLKEPLRHIEAFAGLLSDLLAPEAKTRLNVMVNGIEASSRRLRALINDLAEYSRVGRQARPLAPISLNEVLSEVLADLKPNLQDTRAAVSADDLPVVLCDASQIRQLLQNLISNALKYRDAFRPPQIEISSAVDTETKDSHDRHPRVRVTISDNGIGFDPKYAEQIFEPFQRLHGPDEYEGTGIGLAICRKIVSRHGGSITATSMPGSGSAFSFTLSLRGADDVEQTS GT:EXON 1|1-776:0| BL:SWS:NREP 1 BL:SWS:REP 25->764|PHYA_ANASP|e-150|39.1|724/765| COIL:NAA 1 COIL:NSEG 1 COIL:REGION 543->543| BL:PDB:NREP 2 BL:PDB:REP 27->334|2oolA|e-120|69.1|304/304| BL:PDB:REP 547->760|3dgeA|5e-16|31.1|206/237| RP:PDB:NREP 2 RP:PDB:REP 47->519|3c2wD|5e-53|30.8|452/478| RP:PDB:REP 491->774|3d2rB|3e-31|14.7|279/362| RP:PFM:NREP 5 RP:PFM:REP 29->136|PF08446|1e-22|49.1|106/108|PAS_2| RP:PFM:REP 168->319|PF01590|1e-05|32.0|128/143|GAF| RP:PFM:REP 361->511|PF00360|1e-26|38.0|150/179|Phytochrome| RP:PFM:REP 539->603|PF00512|7e-06|38.5|65/69|HisKA| RP:PFM:REP 650->766|PF02518|3e-19|42.5|106/112|HATPase_c| HM:PFM:NREP 5 HM:PFM:REP 342->521|PF00360|2.2e-60|42.2|180/183|Phytochrome| HM:PFM:REP 29->136|PF08446|1e-27|35.8|106/108|PAS_2| HM:PFM:REP 648->766|PF02518|4.5e-26|32.4|108/111|HATPase_c| HM:PFM:REP 166->325|PF01590|6.6e-20|24.3|148/154|GAF| HM:PFM:REP 540->604|PF00512|1.4e-11|36.7|60/68|HisKA| GO:PFM:NREP 13 GO:PFM GO:0007600|"GO:sensory perception"|PF08446|IPR013654| GO:PFM GO:0008020|"GO:G-protein coupled photoreceptor activity"|PF08446|IPR013654| GO:PFM GO:0018298|"GO:protein-chromophore linkage"|PF08446|IPR013654| GO:PFM GO:0045449|"GO:regulation of transcription"|PF08446|IPR013654| GO:PFM GO:0004872|"GO:receptor activity"|PF00360|IPR013515| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00360|IPR013515| GO:PFM GO:0007600|"GO:sensory perception"|PF00360|IPR013515| GO:PFM GO:0008020|"GO:G-protein coupled photoreceptor activity"|PF00360|IPR013515| GO:PFM GO:0018298|"GO:protein-chromophore linkage"|PF00360|IPR013515| GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 5 RP:SCP:REP 12->137|1ztuA2|2e-27|33.1|118/124|d.110.3.9| RP:SCP:REP 167->327|2k2nA1|4e-50|32.3|161/170|d.110.2.1| RP:SCP:REP 354->519|3c2wA2|2e-34|32.9|152/173|d.110.2.4| RP:SCP:REP 524->603|2c2aA1|1e-10|25.0|80/89|a.30.2.1| RP:SCP:REP 613->766|1b3qA3|5e-26|15.6|154/174|d.122.1.3| HM:SCP:REP 162->340|1mc0A2|4.4e-10|17.8|152/0|d.110.2.1|1/1|GAF domain-like| HM:SCP:REP 520->608|2c2aA1|2.7e-13|29.2|89/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 604->764|1gkzA2|5.6e-40|40.8|152/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 11832 OP:NHOMOORG 957 OP:PATTERN -----------------------3N3473E6C--11-1222242F-C97LF59--------------4 Ed*3B33455553447722-282277222226C66654336DAB83513332589335--67I1A27CBC7122243364F661-422RSjO-b113--A5X6EFshnWZ1111111-------24319645C6P6igecbH8Br3*TquVVGAC99222533KW9Y***J232222242222QEA3322399DIIIIJGIICKGJKKGADCC98MKK666H5HD877677VZ3444444444444444333333443343445555555344554333555332321122222222222111111111211121111111133NBDYBCBGGGECCBBGEE5672JAB3179BH5ORLIG8247465631-1NEQZZZK14234EIXQRGBCROPQO8877876566E-QTSRWSQZEOQ2INNPNPGPUTILJNIBNF8GFEDEDSE5545544539847*OP22122---113911---1111-11-111114DD6588758QKNPTSMEEFDONaaKKKJAISTXSTRX27HKEWLQCCYYQMKADKP8DDCO8332232344IIV*Q*sQGFtU6*laZY2*******Fhidxi**Ff21-11---------------5311A66JH8UHPI5XIEIBCCFHHHJIGCGIGHEJL---A8ID------D989976DCCFDFDECD-CDDCDEECCBCECBDDDDDHEH89995C9CBCDCCCCCCCCBDBCC9BAAD6-ABCDEDCACEED--345555556656Gd6M2121-------11117999958463HIMPUMNUQZIOSVSMOPS2112-21-19EHGJGGGHGLLMPPHGNOQOOJJK555511*3VVDDKK---1-1112-1-------------------------49244424434y3 --1-7A1-------E7997546576633322222333444244344696667483464588822--11-2-----------1113122-2219351222255357B-8-3------------------------------------------------5----1---------1--245H1---2T44F9782181112 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------2- STR:NPRED 752 STR:RPRED 96.9 SQ:SECSTR ########################cccTTTTcccccccEEcTTEEEEEEEcTTccEEEEEccHHHHccccccTTccccHHHHcHHHHHHHHHHHHcccccccccEEEEEEEETTEEEEEEEEEETTEEEEEEEEccccccccTTTTTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEcTTccEEEEEEEEcTTccccTTcEEcTTcccHHHHHHHHHccEEEEccTTcccEEEEccccTTTTcccccTTcccccccHHHHHHHHHHTccEEEEEEEEETTEEEEEEEEEEcccccccHHHHGGGGTHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHcccccHHHHHccccccHHHHccccEEEEEcTTccEEETccccHHHHHHHHHTTcccccccEEEEcccccHTTcccHHHHcccEEEEEEEETTTTEEEEEEEccccccccccccccccccccccccTTcHHHHHHHHTTTcTTccccccHHHHHHHHHHHHHHHHHHTTccHHHHGGGGccTTcHHHHHHHHHHHHHHHHHTTTHHHHHHHHccccccTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccTTcTcEEEEEHHHHHHHHHHHHHHHHHHHHcTcccEEEEcHHHHHHHHHHHHHHHHHHHcTTcHHHTTTccccccEEEEEEEcccEEEEEEEEccccccGGGTTGGGcTTccccccccccccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEccTTTcccccc DISOP:02AL 1-19,723-725,767-777| PSIPRED cccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccEEEEEEccHHHHHcccHHHHccccHHHHccHHHHHHHHHHcccccccccccEEEEEEccccccEEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEccccccEEEEEEEccccccccccccccccccHHHHHHHHHccccEEccccccccEEEEcccccccccEEEEcEEEccccHHHHHHHHHHccEEEEEEEEEEccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHccccEEEEEEccEEEEEEccccHHHHHHHHHHHHHcccccccccccHHHHcccHHHHHHHHccEEEEEccccccEEEEEEcccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHHccEEEEEccccEEEEcHHHHHHHHHHHHHHHEEEccccccEEEEEEEEEccccccccccccEEEEEEEEccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccccc //