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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39642.1
DDBJ      :             transcriptional regulator, CopG family
Swiss-Prot:NIKR_RHOPS   RecName: Full=Putative nickel-responsive regulator;

Homologs  Archaea  42/68 : Bacteria  168/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.43.1d.58.18
:140 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->130 2hzaA PDBj 3e-29 47.7 %
:RPS:PDB   1->131 2ca9B PDBj 8e-29 29.8 %
:RPS:SCOP  1->45 1q5vA1  a.43.1.3 * 2e-12 60.0 %
:RPS:SCOP  50->129 2bj1A2  d.58.18.4 * 1e-21 32.5 %
:HMM:SCOP  1->48 1q5vA1 a.43.1.3 * 3.3e-10 35.4 %
:HMM:SCOP  50->133 1q5yA_ d.58.18.4 * 2.3e-28 42.9 %
:RPS:PFM   53->127 PF08753 * NikR_C 3e-14 49.3 %
:HMM:PFM   53->130 PF08753 * NikR_C 4.1e-33 42.3 78/79  
:HMM:PFM   3->37 PF01402 * RHH_1 3.8e-12 55.9 34/39  
:BLT:SWISS 1->140 NIKR_RHOPS 7e-81 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39642.1 GT:GENE ABE39642.1 GT:PRODUCT transcriptional regulator, CopG family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2686829..2687251) GB:FROM 2686829 GB:TO 2687251 GB:DIRECTION - GB:PRODUCT transcriptional regulator, CopG family GB:PROTEIN_ID ABE39642.1 GB:DB_XREF GI:91683340 InterPro:IPR002145 LENGTH 140 SQ:AASEQ MHRVTITLDDDLMERLDAIIAVRGYQNRSEAIRDLARIGIQQTSAHDSGERCVGAMVYTYDHSKRDLPRKLTQSFHNHHDLSRATMHVHLDHDQCLEVTILDGKASELQHFADHIFSERGVRYGRLVTIPTMDDEQHTHD GT:EXON 1|1-140:0| SW:ID NIKR_RHOPS SW:DE RecName: Full=Putative nickel-responsive regulator; SW:GN OrderedLocusNames=RPD_2412; SW:KW Complete proteome; DNA-binding; Metal-binding; Nickel; Transcription;Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->140|NIKR_RHOPS|7e-81|100.0|140/140| GO:SWS:NREP 4 GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| BL:PDB:NREP 1 BL:PDB:REP 23->130|2hzaA|3e-29|47.7|107/129| RP:PDB:NREP 1 RP:PDB:REP 1->131|2ca9B|8e-29|29.8|131/139| RP:PFM:NREP 1 RP:PFM:REP 53->127|PF08753|3e-14|49.3|75/79|NikR_C| HM:PFM:NREP 2 HM:PFM:REP 53->130|PF08753|4.1e-33|42.3|78/79|NikR_C| HM:PFM:REP 3->37|PF01402|3.8e-12|55.9|34/39|RHH_1| RP:SCP:NREP 2 RP:SCP:REP 1->45|1q5vA1|2e-12|60.0|45/47|a.43.1.3| RP:SCP:REP 50->129|2bj1A2|1e-21|32.5|80/82|d.58.18.4| HM:SCP:REP 1->48|1q5vA1|3.3e-10|35.4|48/48|a.43.1.3|1/1|Ribbon-helix-helix| HM:SCP:REP 50->133|1q5yA_|2.3e-28|42.9|84/0|d.58.18.4|1/1|ACT-like| OP:NHOMO 222 OP:NHOMOORG 210 OP:PATTERN ----1-----------1--11111111-22-111111111111111111143311111111------- --1----------------------------------------------------------------------------111--111------1-------------------------------11-111----1----------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------1-1--------111---111111111111111--------12----1--1----------------1-11---1-111111---------------------------------------1-------------------------------1----------1---1-------1-1-1-----------1-12----111111111111-11111-11111-11--1111------111111111-------------------------1------1--1-----1-1------1-1111-1111111111-1111111111111111111111-----1111111111111111-1111111--------------------------------------------------------------------1--1-------------1--------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 133 STR:RPRED 95.0 SQ:SECSTR cccccccccHHHHHHHHTTTGGGTcccHHHHHHHHHHHHHHHHHccTTcccEEEEEEEEEcTTcTTHHHHHHHHHHHHccEEEEEEEEEcccccEEEEEEEEEcHHHHHHHHHHHHTcTTEEEEEEEEEcGcc####### DISOP:02AL 1-1,132-141| PSIPRED cEEEEEEccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHcccEEEEEEEEEccccccccccc //