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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39651.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  876/915 : Eukaryota  192/199 : Viruses  1/175   --->[See Alignment]
c.2.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->259 1iy8A PDBj 6e-43 41.0 %
:RPS:PDB   58->257 1dohB PDBj 4e-36 23.7 %
:RPS:SCOP  64->255 1pwxA  c.2.1.2 * 5e-44 20.8 %
:HMM:SCOP  5->255 1zemA1 c.2.1.2 * 2.4e-84 42.6 %
:RPS:PFM   60->175 PF00106 * adh_short 1e-16 45.2 %
:HMM:PFM   11->175 PF00106 * adh_short 2.3e-33 25.6 160/167  
:BLT:SWISS 60->259 LVR_LEIAQ 2e-42 41.0 %
:PROS 145->173|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39651.1 GT:GENE ABE39651.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2699654..2700433) GB:FROM 2699654 GB:TO 2700433 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE39651.1 GB:DB_XREF GI:91683349 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR002347 InterPro:IPR002424 LENGTH 259 SQ:AASEQ MTDRIRLDGRVALVTGAAGVIGAATIQLLAERGARIVAIDRDRRALDQVVAALPASTQPLALTADVTQEDQVAGYVRTAVERCGRIDVLYNNAGIEGDITPIVSTSLDGFRRVLDVNVIGVFLGMKHVLPVMHQQNSGSIINTASIAGLIGSNDIIAYTASKHAVIGMTKTAALECSGTKVRVNCVCPGMIDSRMLSAIVEGRNPGPTPVPTERIVERIPARRLGHAAEVASVVAFLASDEASYVSGSAYTVDGGRTAS GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 60->259|LVR_LEIAQ|2e-42|41.0|200/267| PROS 145->173|PS00061|ADH_SHORT|PDOC00060| SEG 11->26|valvtgaagvigaati| SEG 32->47|rgarivaidrdrrald| BL:PDB:NREP 1 BL:PDB:REP 60->259|1iy8A|6e-43|41.0|200/258| RP:PDB:NREP 1 RP:PDB:REP 58->257|1dohB|4e-36|23.7|198/271| RP:PFM:NREP 1 RP:PFM:REP 60->175|PF00106|1e-16|45.2|115/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 11->175|PF00106|2.3e-33|25.6|160/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 64->255|1pwxA|5e-44|20.8|192/252|c.2.1.2| HM:SCP:REP 5->255|1zemA1|2.4e-84|42.6|251/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 16699 OP:NHOMOORG 1124 OP:PATTERN 222124488686766517-42121C66A487C22---------21154--522-22112132753145 IJa5k2-755D282d**PQ-Q*33o*QPQQQd****k***6*C*PKC83D93SHMA6C11KKa4LKeijXC12222121298Y11412778627331--86V5FDyCa8M1111111111111137438B644975HHHNL222KBEBFG7677633221533353GKFW7111121111111IC9BC661J8QGGGGGIGJGHIGGHGPHOOINGIGBHINLGC988887Me866565546666665BBBCCA1C19B16-1-BF55888688AA977767676734444444454444566666676666634422244484358C5554444546956626856331198222A7123325333345523D2JqKKU12212KB*mn78DcRZaTLMNLKKNLNNX-KOZMGqIWcsc2*hhRmeo****vaeILEPPVULTWIJQ88888888RRQC6CFA11111111111222331221222121111AE**L8LncQg*tz***STTUPnn*xXWWWAW*e*a**l48UUNJBLKIVJdMsp7FA5869D71221111349NI88P6B412111433425964G6385ADDBNV34233323211312322222222243466DA9ACEF8NB48A9AB9EEBA99D9GAA8B1-2345811-111CGHF6J7DGGDDCCCCD-GDEDEACDFDGBFCCDDCDNSPC98ABB89AACBABBA9A9ABUBB9BA9B4199999999999A111835244AA9A3EINJ222828212222462KLKPM8H9FCPARTNQJPVgOMMVPOOMO8564465454567G767768B6ABKNLIMHG9AA85652335CC7677--------1-4----2-1-3-1------3-------33421656763C3 11--QEH-942-7CFhveeofpauqtkNODJGIHKHEUNQKPQFGFdWbniu**XcVNOPLPB8G3874B43D8C332348DCDCC2A-O*OvJbGFBECFDJMLH-INE*VcOOQLA594BHBWN5O6Z*L-MJT97ADM9CNB7D777G47KDJJRXelPBpUKKDHPQGUTS5DB4h333BKIgd*eiMFEVFGFC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 259 STR:RPRED 100.0 SQ:SECSTR ccTTTccTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHHHHTTcEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEccccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHGGGGcccHHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGGGTTccccEEEEcccccGc DISOP:02AL 1-3| PSIPRED ccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //