[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39677.1
DDBJ      :             peptidase M23B
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  706/915 : Eukaryota  6/199 : Viruses  11/175   --->[See Alignment]
b.84.3
:459 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   346->451 2hsiA PDBj 5e-23 44.3 %
:RPS:PDB   324->437 1cfmA PDBj 4e-27 18.4 %
:RPS:SCOP  352->450 1qwyA  b.84.3.2 * 7e-28 36.4 %
:HMM:SCOP  239->449 1qwyA_ b.84.3.2 * 4.1e-49 40.8 %
:RPS:PFM   192->265 PF06074 * DUF935 4e-05 37.0 %
:RPS:PFM   352->441 PF01551 * Peptidase_M23 2e-26 58.9 %
:HMM:PFM   351->445 PF01551 * Peptidase_M23 2.5e-36 63.2 95/96  
:HMM:PFM   92->118 PF08581 * Tup_N 0.00094 22.2 27/79  
:BLT:SWISS 313->445 YEBA_SHIFL 2e-23 44.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39677.1 GT:GENE ABE39677.1 GT:PRODUCT peptidase M23B GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2730459..2731838) GB:FROM 2730459 GB:TO 2731838 GB:DIRECTION - GB:PRODUCT peptidase M23B GB:PROTEIN_ID ABE39677.1 GB:DB_XREF GI:91683375 InterPro:IPR002886 LENGTH 459 SQ:AASEQ MSYRSGHPSEHHPNHAPNYGRPQPHRAQRPHPGQRPSPEVPAEASSYTIAHAGKQVRIGPVVFWIVVGTIVALGCWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKVDRTTSRQLLDQEQFDQKLDQVMRRQTMLESRASALNTLPDVVVTGSIKSSRTPSTDTAPAGPLKPSPINDTVIFVAPPDREARLESRSPAAAPALPTTQYAKAQGLDTALSKLEQSLDQVEKRQIAALGSVEESYETRARRMRGVFTDLGLDTRGLEAAAPRAGIGGPFVPLKAPSTNASSFDRQLYRINLGRAQLDRLNRALSLVPYRKPVIGNVEFSSGFGVRSDPFLGRPAMHTGLDFRASSGDPVRATAIGKVVNAGWQGGYGQMVEIDHGNGLSTRYGHLSKIIAKVGQSIQIGQVIGEVGSTGRSTGPHLHYETRIEGEAVDPQKFLRAGVRLAGAG GT:EXON 1|1-459:0| BL:SWS:NREP 1 BL:SWS:REP 313->445|YEBA_SHIFL|2e-23|44.4|133/440| TM:NTM 1 TM:REGION 58->79| SEG 20->36|grpqphraqrphpgqrp| BL:PDB:NREP 1 BL:PDB:REP 346->451|2hsiA|5e-23|44.3|106/227| RP:PDB:NREP 1 RP:PDB:REP 324->437|1cfmA|4e-27|18.4|114/251| RP:PFM:NREP 2 RP:PFM:REP 192->265|PF06074|4e-05|37.0|73/476|DUF935| RP:PFM:REP 352->441|PF01551|2e-26|58.9|90/96|Peptidase_M23| HM:PFM:NREP 2 HM:PFM:REP 351->445|PF01551|2.5e-36|63.2|95/96|Peptidase_M23| HM:PFM:REP 92->118|PF08581|0.00094|22.2|27/79|Tup_N| RP:SCP:NREP 1 RP:SCP:REP 352->450|1qwyA|7e-28|36.4|99/234|b.84.3.2| HM:SCP:REP 239->449|1qwyA_|4.1e-49|40.8|211/270|b.84.3.2|1/1|Duplicated hybrid motif| OP:NHOMO 2400 OP:NHOMOORG 723 OP:PATTERN -------------------------------------------------------------------- 112-131322211111111-141111111111212267AA1--1-2212351544112--527-223786-------------2-522664635112--22234311131---------------1213153313222232---42G645564433312233234568864-3-----3----55232223-21444453433435333432222443112424521111-83---1-1--1------2--1-2----------------------12-111-----------------------------------------4541-22222221213-22-343215-1721647657445446565531-33-544312111223333333333333333333334-334434343451433233333333325453111111111-------------43411----------22222222212211-1225534355556555555345544456555536455343422222334443332444432444342222222244344334434455535555364243434666695212223444443334333333343322116523345454366666756756666667661-2434411----45333434434444544-45444444454444444434343333333333333333333334443444431433333333333123522222433313624121232333223333333433111-4555554544544446444---------2456776676877555554544444342421449988994444445455--------------------------2111111111--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------6--1--1--1---- -1--------------------------------------------------------------------------------1---------------------11--1----1--------1---1-------111-------------------------------------- STR:NPRED 167 STR:RPRED 36.4 SQ:SECSTR ###############################################################################################################################################################################################################################################################################################EEEEEEEcTTccEEEEEcTTccEE#ETTcccccccHEEcccTTTcTTccccEEEEEEEEEEccccccTTccccccccccccccEEEEEEEccccEEEEEEcTTccEEEEEEcccccccccTTcEEcTTccccccccccEEEEEEEEccccEGGGEEccHHHHHHHHHH#### DISOP:02AL 1-39,197-210,226-227,229-234,248-266,284-304,308-320,456-460| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHcccccccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHccccccccccccccHHHcccccccccccEEEEEccccccccccccccccccEEcccccccEEEEccccEEEEEEEccccEEEEEEEccccEEEEEEEccccccccccEEccccEEEEEcccccccccEEEEEEEEccEEEcHHHHHcccccccccc //