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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39682.1
DDBJ      :             tyrosyl-tRNA synthetase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  906/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
c.26.1d.66.1
:418 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->327 1jilA PDBj 4e-74 43.8 %
:RPS:PDB   1->321 2akeA PDBj 8e-56 18.8 %
:RPS:PDB   297->412 1c05A PDBj 8e-05 15.7 %
:RPS:SCOP  6->320 1jiiA  c.26.1.1 * e-112 43.6 %
:RPS:SCOP  335->418 1h3eA2  d.66.1.4 * 1e-07 30.4 %
:HMM:SCOP  5->327 1jilA_ c.26.1.1 * 2.7e-92 42.2 %
:HMM:SCOP  334->419 1h3fA2 d.66.1.4 * 7.7e-15 35.8 %
:RPS:PFM   39->312 PF00579 * tRNA-synt_1b 2e-24 33.3 %
:HMM:PFM   33->327 PF00579 * tRNA-synt_1b 1e-73 37.1 283/292  
:HMM:PFM   359->394 PF01479 * S4 5.3e-07 33.3 36/48  
:BLT:SWISS 1->418 SYY_RHOPA 0.0 86.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39682.1 GT:GENE ABE39682.1 GT:PRODUCT tyrosyl-tRNA synthetase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2738631..2739887) GB:FROM 2738631 GB:TO 2739887 GB:DIRECTION - GB:PRODUCT tyrosyl-tRNA synthetase GB:PROTEIN_ID ABE39682.1 GB:DB_XREF GI:91683380 InterPro:IPR002305 InterPro:IPR002307 InterPro:IPR002942 LENGTH 418 SQ:AASEQ MTAFKSDFMNVLQQRGFIHQISDPESLDALASRREVVAYVGYDCTASSLHVGHLLSIMMLHWLQATGNKPVALMGGGTTRVGDPSGRDETRKILSLEQIEANKDSIKRVFANFITFGDGGNKALMVDNADWLTKLNYIEMLRDLGRHFSVNRMLTMDSVRMRLEREQELSFIEFNYMILQSYDYVELSRRHGCNLQMGGSDQWGNIVTGVDLGRRMGTQQLHALTCPLLTTSSGAKMGKTAAGAVWLNGDMLPAYDYWQYWRNTEDADVGRFLKLFTLLPIDDIERLSKLQGAEINEAKKILATEATALVHGRDAADKAEATARTTFEQGGTAQDLPSVDVARAELDAGLSVLAAFAEKSGLVASNGEARRQIKAGGLKVNDVPVTDEKMALTAADLTADGVIKLSMGKKKHVLLRPA GT:EXON 1|1-418:0| BL:SWS:NREP 1 BL:SWS:REP 1->418|SYY_RHOPA|0.0|86.8|418/418| BL:PDB:NREP 1 BL:PDB:REP 12->327|1jilA|4e-74|43.8|313/323| RP:PDB:NREP 2 RP:PDB:REP 1->321|2akeA|8e-56|18.8|303/373| RP:PDB:REP 297->412|1c05A|8e-05|15.7|102/159| RP:PFM:NREP 1 RP:PFM:REP 39->312|PF00579|2e-24|33.3|255/279|tRNA-synt_1b| HM:PFM:NREP 2 HM:PFM:REP 33->327|PF00579|1e-73|37.1|283/292|tRNA-synt_1b| HM:PFM:REP 359->394|PF01479|5.3e-07|33.3|36/48|S4| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00579|IPR002305| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00579|IPR002305| GO:PFM GO:0005524|"GO:ATP binding"|PF00579|IPR002305| GO:PFM GO:0005737|"GO:cytoplasm"|PF00579|IPR002305| GO:PFM GO:0006412|"GO:translation"|PF00579|IPR002305| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00579|IPR002305| RP:SCP:NREP 2 RP:SCP:REP 6->320|1jiiA|e-112|43.6|312/319|c.26.1.1| RP:SCP:REP 335->418|1h3eA2|1e-07|30.4|79/81|d.66.1.4| HM:SCP:REP 5->327|1jilA_|2.7e-92|42.2|320/323|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 334->419|1h3fA2|7.7e-15|35.8|81/0|d.66.1.4|1/1|Alpha-L RNA-binding motif| OP:NHOMO 1184 OP:NHOMOORG 1085 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111211111111111111111111111111111111111111111111111111111121112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222122222211221222211121111111111111111111111111111111212111111111111111111111111111111111111111111111111111111111111221111111122222222222211221111211111111122111111111111111111111111111111111111111111111111111-111111111111111111121111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111112111111111111111111111-111111111111111111111111-111-11111111111111111111111222111111111111111111111111111111111111111111111111111111111111111111-11111111111111111222211111111111111111111111111122222221221111111-11111111111111111111111111111111-11111111111111111111111111111111 11--111-1-----111111111111111111111111-21111111111111111111111111111-1111111112111111111-11-11111111111111-121211111-11-11111111-151-11111111111-111--11141111212111111111612221111A1111111121111111211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 99.5 SQ:SECSTR HHHHHTccccHHHHTTcEEEEEcHHHHHHHHTTccEEEEEEEccccccccHHHHHHHHHHHHHHHHHTccEEEEcHHHHEcHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHTTTccTTcEEEEEHHHHHTTccHHHHHHHHHHTccHHHHHHHTTTTcHHcccTTccHHHHTHHHHHHGGGHHTTccccEEEEEEEGGGHHHHHHHHHHHHHTTcccEEEcccccTTcccccccTTcGGGcccTTcccccHHHHHHHcccTcTTcHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccTTTTTTTTTTcccccHHHHHHHHTTcEEETTEEcccTTccccTTEccTTTEEEEcGGGcccEEEE## DISOP:02AL 1-4,157-169| PSIPRED ccHHHHHHHHHHHHcccccccccHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEEEEcHHHcccccccccHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHccHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHcccccEEEEEccEEcccccccccccccEEEEccccccHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHcccccccHHHcccccHHHHHHHHHcccccccHHHHHHHHcccEEEccEEcccccccccHHHHccccEEEEEEccEEEEEEEEc //