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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39709.1
DDBJ      :             transport system permease protein
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  605/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:340 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->328 2nq2B PDBj 2e-36 34.8 %
:RPS:PDB   96->148 2a6pA PDBj 5e-04 26.4 %
:RPS:SCOP  51->330 1l7vA  f.22.1.1 * 2e-43 27.9 %
:HMM:SCOP  5->331 1l7vA_ f.22.1.1 * 3.2e-71 39.0 %
:RPS:PFM   17->330 PF01032 * FecCD 2e-38 40.7 %
:HMM:PFM   17->330 PF01032 * FecCD 7.5e-88 40.4 307/311  
:BLT:SWISS 9->328 Y1471_HAEIN 2e-40 34.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39709.1 GT:GENE ABE39709.1 GT:PRODUCT transport system permease protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2769762..2770784) GB:FROM 2769762 GB:TO 2770784 GB:DIRECTION - GB:PRODUCT transport system permease protein GB:PROTEIN_ID ABE39709.1 GB:DB_XREF GI:91683407 InterPro:IPR000522 InterPro:IPR001626 LENGTH 340 SQ:AASEQ MASQRITPVVIALAVGLAFVVVIAAGTGPYPIAPGEVIAAMLDRLTGGRDDGQAAIVLFQVRLPRIAAAICVGAALAAAGAAYQCLFRNPLVSPDILGVSHGAGFGAVIGILFGFPIAVIELMGFVTGSLTVVLVSALAWSLRERGDILMLVLAGIVVGAIAAAAISLVKIVADPYSQLPMITYWLLGSLASIRPEDLAVVIPTVAVGLVPLFLLRWRIAVLSLGDDDARALGVDARRTRQVVIAAATLITASVVAVSGVIGWVGLMVPHLARLLVGPRFDRLLPVSILLGAAFMVVVDTLARTIARIEIPIGVLTALVGGGLFVWLITRHGTRALWRRE GT:EXON 1|1-340:0| BL:SWS:NREP 1 BL:SWS:REP 9->328|Y1471_HAEIN|2e-40|34.5|319/337| TM:NTM 9 TM:REGION 7->28| TM:REGION 57->79| TM:REGION 118->140| TM:REGION 149->171| TM:REGION 173->195| TM:REGION 197->216| TM:REGION 246->268| TM:REGION 283->305| TM:REGION 309->331| SEG 66->82|iaaaicvgaalaaagaa| SEG 151->173|lvlagivvgaiaaaaislvkiva| BL:PDB:NREP 1 BL:PDB:REP 9->328|2nq2B|2e-36|34.8|293/300| RP:PDB:NREP 1 RP:PDB:REP 96->148|2a6pA|5e-04|26.4|53/193| RP:PFM:NREP 1 RP:PFM:REP 17->330|PF01032|2e-38|40.7|305/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 17->330|PF01032|7.5e-88|40.4|307/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 51->330|1l7vA|2e-43|27.9|276/324|f.22.1.1| HM:SCP:REP 5->331|1l7vA_|3.2e-71|39.0|313/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 2057 OP:NHOMOORG 654 OP:PATTERN --2---1111111-1----2-112222212211--321212121164854D81-2222342-11---- ----23446685551-1----1---3----------3A46-2111121333-6311-32232-697325B3--------1221-----222--122-----111-1122----------------13122111223123221137-5-2222-----------42-1451-------------112--22-165BBCBCACB7CCCCBC98888ACCB4657653333333HE266666665666666433453-1----1---33-1--2--------21123331--111111111112333333333333211---111123B4488887875852322265525111421-2BA2--31222322214-21-111122122221--2345343422222222225-11111122212-4666433565651-12-22A1-1131-22222222-331--23-------------------------------1-1112221-333321222211--22221121--1-2--111-21--212--1111-1-151---------1-11-65222123-3111--------341111-134-253-11112-1-111111121---22142231112211232-21221121222222---112-------B3441554444444542-3452446264366444442889565544-43444444444434722733351-355555545555--2-----------163E111152--1-12--4--11-11-242-1211231512321-444---------16233333337493311---------------111------------5-1-------------------------1121122222-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 87.6 SQ:SECSTR ########HHHHHHHHHHHHHHHHHTccTTccccccc##################HcGGGTcHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTTEEEEEcHHHHHHHHHHHTTccGGGGGGccccTTEEEEEEEETTEEEEEEEEEEHHHHHHHHHHHHHHHTcHcc#####cTTTHHHHHHHHHccccTTccHHHHHHHHHHHHHHHHHHHHTTTGGGGGGccHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHccccccTTTHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHc########### DISOP:02AL 1-2,334-341| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccc //