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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39735.1
DDBJ      :             Lysine--tRNA ligase
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  803/915 : Eukaryota  113/199 : Viruses  0/175   --->[See Alignment]
d.104.1
:351 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->342 3g1zB PDBj 2e-39 37.8 %
:RPS:PDB   12->345 3bjuC PDBj 2e-25 20.7 %
:RPS:SCOP  15->345 1bbuA2  d.104.1.1 * 3e-45 28.3 %
:HMM:SCOP  7->349 1bbuA2 d.104.1.1 * 8.5e-62 30.5 %
:RPS:PFM   15->133,253->345 PF00152 * tRNA-synt_2 8e-07 35.1 %
:HMM:PFM   20->344 PF00152 * tRNA-synt_2 5.8e-53 25.2 290/323  
:BLT:SWISS 45->345 SYK3_PROMH 5e-43 40.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39735.1 GT:GENE ABE39735.1 GT:PRODUCT Lysine--tRNA ligase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2800417..2801472 GB:FROM 2800417 GB:TO 2801472 GB:DIRECTION + GB:PRODUCT Lysine--tRNA ligase GB:PROTEIN_ID ABE39735.1 GB:DB_XREF GI:91683433 InterPro:IPR002313 InterPro:IPR004364 InterPro:IPR006195 LENGTH 351 SQ:AASEQ MQGGTFASPWWDPARYLDRKPFLRARSAVTRAARDWFAAAEFAEVETAILQLSPGNETHLHAPRTEFKGPDGELRTRFLRTSPEFACKKLLAAGEERIFEFARVFRDRERGRLHLPEFTMLEWYRAGEGYQTVIADCAALIALAARTTGIGQFSFRGRTADPQAEPEMLTVAAAFARFAGIDLLATIIGGEGDRDALARAAAAKVRVADDDNWSDIFSKVLVDHIEPRLGEGRLTVLCEYPAPEAALARTKADDPRVAERFEVYACGVELANGFGELTDAAEQRLRFTASMDEKERRYGERYPLDEDFLAAVGRMPEASGVALGFDRLVMLAAGAMRIDQVVWTPPADEAS GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 45->345|SYK3_PROMH|5e-43|40.6|281/325| SEG 31->44|raardwfaaaefae| SEG 134->145|iadcaalialaa| SEG 193->211|drdalaraaaakvrvaddd| BL:PDB:NREP 1 BL:PDB:REP 11->342|3g1zB|2e-39|37.8|299/309| RP:PDB:NREP 1 RP:PDB:REP 12->345|3bjuC|2e-25|20.7|328/501| RP:PFM:NREP 1 RP:PFM:REP 15->133,253->345|PF00152|8e-07|35.1|203/337|tRNA-synt_2| HM:PFM:NREP 1 HM:PFM:REP 20->344|PF00152|5.8e-53|25.2|290/323|tRNA-synt_2| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 1 RP:SCP:REP 15->345|1bbuA2|3e-45|28.3|321/342|d.104.1.1| HM:SCP:REP 7->349|1bbuA2|8.5e-62|30.5|334/342|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1245 OP:NHOMOORG 937 OP:PATTERN ------1111111111-1111----------------------11-11--111--------------- 111-1-2111121111111-1111-111111-11111111--1---11----111111----122121--1-------1111-21222111111111-1111111111-11111111111111111111111111111111222111111111111111111111111111111111111111-1111---11111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111121-1111111111111111111111111121111-----1111111111111------------11111111-1-22222222222221111---11111---1111111111121111-----------------------------------11111111111111111111111111111111111111111111111111111111111111111111111222221111111111222222222222222221111111111111111111111111111112222222211111111111111111112-2122212122222222223333334333-333333333333333333333322222222222222222222222222223212222222222221122222222222222222222222222223222222222222111111111111111111122222222222222222222222222222222222222222-222222--------11111111-111-111111-1-121111111111111111- --11112-422-11111111111111111111111111111-111111--1111111111111--111--21---211221-----21-12111111111---21---21---------------------------------------------------2-11-121------211162221-11321142221111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 98.6 SQ:SECSTR #####HHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEcccccccccccEEEETTTTETTTEEEEEccccHHHHHHHHHTTccEEEEEEEEEccccccTTcccEEEEEEEEEETccHHHHHHHHHHHHHHHHHHHHccEEEEcTTcTTcccEEEEccHHcccEEEEHHHHHHHHHTGTTcHHHHHHHHHHHHHHTccccccccHHHHHHHHHHHHTGGcccEEEEcccGGGcTTcccccccTTcccEEEEEETTEEEEEEEEccccHHHHHHHHHHHHHHHHTTcTTcccccHHHHHHHTTcccEEEEEEEHHHHHHHHTTcccGGGccccccccccc DISOP:02AL 1-4,8-8,349-352| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccEEEEEEEEEccccccccccEEEEEEHHHHcccHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccEEEEHHHHHHHHcccccHHHHcccccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHccccccccEEEEEEEEEccEEEccHHHEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccEEEccHHHHHHHHHccccccEEcccccccccc //