[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39812.1
DDBJ      :             DNA-3-methyladenine glycosylase
Swiss-Prot:3MGH_RHOPS   RecName: Full=Putative 3-methyladenine DNA glycosylase;         EC=3.2.2.-;

Homologs  Archaea  3/68 : Bacteria  332/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
b.46.1
:202 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->146 1f4rA PDBj 5e-19 54.7 %
:RPS:PDB   17->202 1bnkA PDBj 7e-29 34.3 %
:RPS:SCOP  17->202 1bnkA  b.46.1.2 * 3e-29 34.3 %
:HMM:SCOP  15->199 1ewnA_ b.46.1.2 * 1.3e-58 50.3 %
:RPS:PFM   59->192 PF02245 * Pur_DNA_glyco 1e-32 55.2 %
:HMM:PFM   21->194 PF02245 * Pur_DNA_glyco 1.3e-68 53.4 174/184  
:BLT:SWISS 14->202 3MGH_RHOPS 7e-98 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39812.1 GT:GENE ABE39812.1 GT:PRODUCT DNA-3-methyladenine glycosylase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2895647..2896255) GB:FROM 2895647 GB:TO 2896255 GB:DIRECTION - GB:PRODUCT DNA-3-methyladenine glycosylase GB:PROTEIN_ID ABE39812.1 GB:DB_XREF GI:91683510 InterPro:IPR003180 LENGTH 202 SQ:AASEQ MARSRVPAAASPAKLGPLLSRRFFARSVHEVAPELIGATLLVAGVGGLIVEVEAYHHTDPAAHSYGGETPRNRVMFGPPGFAYVYRSYGIHWCVNFVCEAEGSASAVLIRALAPTHGLGVMRKHRGLDDERSLCSGPGKLTQALGITIAHNGAPLDIEPFAIHRRTVEPDIGTGPRIGISKAIELPWRYGLRRSRLVSKPFK GT:EXON 1|1-202:0| SW:ID 3MGH_RHOPS SW:DE RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; SW:GN OrderedLocusNames=RPD_2583; SW:KW Complete proteome; DNA damage; DNA repair; Hydrolase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 14->202|3MGH_RHOPS|7e-98|100.0|189/202| GO:SWS:NREP 3 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| SEG 2->13|arsrvpaaaspa| SEG 35->54|ligatllvagvgglivevea| BL:PDB:NREP 1 BL:PDB:REP 59->146|1f4rA|5e-19|54.7|86/199| RP:PDB:NREP 1 RP:PDB:REP 17->202|1bnkA|7e-29|34.3|181/200| RP:PFM:NREP 1 RP:PFM:REP 59->192|PF02245|1e-32|55.2|134/185|Pur_DNA_glyco| HM:PFM:NREP 1 HM:PFM:REP 21->194|PF02245|1.3e-68|53.4|174/184|Pur_DNA_glyco| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF02245|IPR003180| GO:PFM GO:0003905|"GO:alkylbase DNA N-glycosylase activity"|PF02245|IPR003180| GO:PFM GO:0006284|"GO:base-excision repair"|PF02245|IPR003180| RP:SCP:NREP 1 RP:SCP:REP 17->202|1bnkA|3e-29|34.3|181/200|b.46.1.2| HM:SCP:REP 15->199|1ewnA_|1.3e-58|50.3|183/214|b.46.1.2|1/1|FMT C-terminal domain-like| OP:NHOMO 416 OP:NHOMOORG 385 OP:PATTERN ----------------------------------------------1-------------------11 111111-111111111111-11111111111111111111111111--1111111111--1111111111--------1---1-------------1--1-----11-11-------1111111-11111111-11---------1---1---1111111111--11---11111-112111-111-------11111111111111111-11-1111----111111111--111111111111111111111-1111111-11111111------------------------------------------1-----------1111111111111--111111-1--------11111---1-------11-11--1------111111111111------------1131111111--111111111111--------1111---------------1------11111--111-111111111111111------------1111------1-11------1-1--------------------1----------------11---1--------------111------111111--------------------------------------------------------------1----------------------------------------------------------------------------------------------2------1111--------------------111111--1--1------------------11-1-111---------------1-1111111-------------------1-----------------------------------------11- --------1-------------------------------------------------------------------------------------------------2---211111-1-11-1112111693-213-1--3-111-11-11--21111-111-1-1-------22-----------111-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 183 STR:RPRED 90.6 SQ:SECSTR ################TcccHHHHcccHHHHHHHHTTcEEEEEcTTccEEEEEEccTTcTTcTTGGGccTTGGGGGccTTcEEEEEETTTEEEEEEEcccTTTTcEEEEEEEEEEEcHHHHHHHHccccTHHHHccHHHHHHHTTccGGGTTccTTccccEEEEccEEcccccG###GGGGGGccccEEEETTcTTcccccH DISOP:02AL 1-10,199-199,201-203| PSIPRED cccccccccccHHHccccccHHHccccHHHHHHHHHHHHHHHHcccEEEEEEEEccccccHHHHccccccccHHHHccccEEEEEHHHcHHHHHEEEEcccccccEEEEEEccccccHHHHHHccccccHHHHHccHHHHHHHHcccHHHccccccccccEEEcccccccEEEEccccccccccccEEEEEccccccccccc //