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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39860.1
DDBJ      :             Integral membrane protein TerC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  360/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:240 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   106->160 3cd0D PDBj 6e-04 16.4 %
:RPS:PFM   21->205 PF03741 * TerC 1e-19 36.3 %
:HMM:PFM   15->204 PF03741 * TerC 6.7e-49 37.5 176/184  
:BLT:SWISS 21->236 YEGH_SHIFL 6e-40 48.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39860.1 GT:GENE ABE39860.1 GT:PRODUCT Integral membrane protein TerC GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2949742..2950464 GB:FROM 2949742 GB:TO 2950464 GB:DIRECTION + GB:PRODUCT Integral membrane protein TerC GB:PROTEIN_ID ABE39860.1 GB:DB_XREF GI:91683558 InterPro:IPR005496 LENGTH 240 SQ:AASEQ MIDLIYSPEAWAALLTLTALEIVLGIDNIIFLSVLVSRIPEPQATRARQIGLALALIFRLLLLSVLVWLIGLTAPVFSIAGQSFSWRDIILIAGGLFLIAKATHEIHAEVEAREAGHKGPDVRTAFAWVIVQIVIVDLVFSIDSIITAIGMAKDIEIMVAAVLIAMLIMYVSSGPVARFVSEHPTTKMLALAFLVLIGVALVADGFAFHIPRGYIYFAILFSGAVEFFNVLAKRNRVKPQ GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 21->236|YEGH_SHIFL|6e-40|48.6|216/527| TM:NTM 7 TM:REGION 15->37| TM:REGION 52->74| TM:REGION 83->105| TM:REGION 125->147| TM:REGION 153->175| TM:REGION 186->208| TM:REGION 211->232| SEG 10->20|awaalltltal| SEG 51->72|glalalifrllllsvlvwligl| SEG 89->100|iiliagglflia| RP:PDB:NREP 1 RP:PDB:REP 106->160|3cd0D|6e-04|16.4|55/396| RP:PFM:NREP 1 RP:PFM:REP 21->205|PF03741|1e-19|36.3|171/178|TerC| HM:PFM:NREP 1 HM:PFM:REP 15->204|PF03741|6.7e-49|37.5|176/184|TerC| GO:PFM:NREP 1 GO:PFM GO:0016021|"GO:integral to membrane"|PF03741|IPR005496| OP:NHOMO 565 OP:NHOMOORG 363 OP:PATTERN -------------------------------------------------------------------- --------------1------------------------------1------1-----------1-----1--------111-----------------11-11-11111---------------11111-11111111-----1---------------------1----------------112-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111111111111111111-1-122222222222-1111111111-112211111111122-11-----------------------1-111111---11---------------111--1-1--233211111111----11111111-11111112-1111111----1-1-221-1-11111111111111111-111---11-----1111111-11111-1---1111111111111111111-------222--1-1---------11------1---21--1---11111133332233334334432-333334333333333333333333221333322322233333333333333-132222222122211-------1111--1--111-11-11111--111111121--3233333333-33331222-------------1-----11-1122----------------111111-----------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 55 STR:RPRED 22.9 SQ:SECSTR #########################################################################################################EEEccccccGGGGcHHHHHHHHHTTccccTTHHHHHHHHHHHHHHHHHHHHHHHH################################################################################ DISOP:02AL 108-124,233-233,236-241| PSIPRED cHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc //