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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39901.1
DDBJ      :             Protein of unknown function DUF193
Swiss-Prot:NRDR_RHOPS   RecName: Full=Transcriptional repressor nrdR;

Homologs  Archaea  4/68 : Bacteria  738/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.98.1
:160 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  49->143 1r1rA1  a.98.1.1 * 7e-16 14.6 %
:RPS:PFM   49->136 PF03477 * ATP-cone 3e-12 38.6 %
:HMM:PFM   50->136 PF03477 * ATP-cone 2.8e-25 34.5 87/89  
:HMM:PFM   2->50 PF09526 * DUF2387 8.6e-05 18.6 43/71  
:BLT:SWISS 1->160 NRDR_RHOPS 5e-88 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39901.1 GT:GENE ABE39901.1 GT:PRODUCT Protein of unknown function DUF193 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2985919..2986401 GB:FROM 2985919 GB:TO 2986401 GB:DIRECTION + GB:PRODUCT Protein of unknown function DUF193 GB:PROTEIN_ID ABE39901.1 GB:DB_XREF GI:91683599 InterPro:IPR003796 InterPro:IPR005144 LENGTH 160 SQ:AASEQ MRCPNCNSLDTQVKDSRPTEDSSVIRRRRVCIACNFRFTTFERVQLRELTVIKRNGRRVPFDRDKLVRSVQISLRKRPVEPERVEQLVSAIVRELESSGEADISSETIGEIVMDHLRKLDDVAYVRFASVYRNFREAKDFEAVLGELSGEEEARPTLVRK GT:EXON 1|1-160:0| SW:ID NRDR_RHOPS SW:DE RecName: Full=Transcriptional repressor nrdR; SW:GN Name=nrdR; OrderedLocusNames=RPD_2672; SW:KW ATP-binding; Complete proteome; DNA-binding; Metal-binding;Nucleotide-binding; Repressor; Transcription;Transcription regulation; Zinc; Zinc-finger. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->160|NRDR_RHOPS|5e-88|100.0|160/160| GO:SWS:NREP 6 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| RP:PFM:NREP 1 RP:PFM:REP 49->136|PF03477|3e-12|38.6|88/89|ATP-cone| HM:PFM:NREP 2 HM:PFM:REP 50->136|PF03477|2.8e-25|34.5|87/89|ATP-cone| HM:PFM:REP 2->50|PF09526|8.6e-05|18.6|43/71|DUF2387| RP:SCP:NREP 1 RP:SCP:REP 49->143|1r1rA1|7e-16|14.6|89/218|a.98.1.1| OP:NHOMO 744 OP:NHOMOORG 742 OP:PATTERN ---------------------------1-111------------------------------------ 1111111111111111111-111111111111111111111111111111111111111111111111111111111111111--111----------------------111111111111111-----------1111111111111111111111111111111---11111111111111111111-1111111111111111111111-11111111111111111111111111111111111111111111111111111111111---111111111111111111111111111-111111111111111111111111111111111111111111111111111-1111111-1-1111-11--1111111111-11111111111111111111111-11111111111-1111111-111111111111111111111111111111113111111111111-------------------1111111111111111111111111111111111111111111111111111111111111111111111111111111111----------1111111111111111--------------------------11111111111111111111111111111111--11111------11111111111111111-11111111111111111111111111111111111111-1111111111111-111111111111--111111111111111111111111111111111111111111111111111111111111---------111111111111111111111111111111-----------------1---------------------------11111-1111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 144-161| PSIPRED cccccccccccEEEEEEEcccccccHHHHccccccccccccEEEEEEEEEEEEcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHcc //