[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39944.1
DDBJ      :             thymidylate kinase
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  765/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->215 4tmkA PDBj 1e-27 40.4 %
:RPS:PDB   13->204 1e2mA PDBj 8e-13 14.4 %
:RPS:SCOP  15->211 1g3uA  c.37.1.1 * 3e-48 26.7 %
:HMM:SCOP  11->218 1e2kA_ c.37.1.1 * 1.7e-58 40.8 %
:RPS:PFM   18->201 PF02223 * Thymidylate_kin 3e-38 48.0 %
:HMM:PFM   18->211 PF02223 * Thymidylate_kin 2.5e-47 39.2 186/186  
:BLT:SWISS 1->220 KTHY_NITHX 2e-83 66.2 %
:PROS 104->116|PS01331|THYMIDYLATE_KINASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39944.1 GT:GENE ABE39944.1 GT:PRODUCT thymidylate kinase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 3030625..3031383 GB:FROM 3030625 GB:TO 3031383 GB:DIRECTION + GB:PRODUCT thymidylate kinase GB:PROTEIN_ID ABE39944.1 GB:DB_XREF GI:91683642 InterPro:IPR000062 LENGTH 252 SQ:AASEQ MVEKTPRTNSMHGRFITFEGGEGSGKSTQIKLLAKRLEGANLRTLVTREPGGSPGAEIVRHLLLAGVGRLIGGAEAEALLFAAARDDHVRTLIQPALESGVWVLCDRFFDSTRVYQGRLGEVSPAMLNALQDVTIGAMKPDLTVILDVPVEIGLARAAVRRGSEAPDRFESESIDFHRRLRDAYRQIAAAEPERCVVIDANAEPHVVAARIWLTVQERLLGWPQAKVEVKPEAKSKAESKAKTKSKAKAKSA GT:EXON 1|1-252:0| BL:SWS:NREP 1 BL:SWS:REP 1->220|KTHY_NITHX|2e-83|66.2|219/230| PROS 104->116|PS01331|THYMIDYLATE_KINASE|PDOC01034| SEG 74->84|aeaeallfaaa| SEG 225->251|akvevkpeakskaeskaktkskakaks| BL:PDB:NREP 1 BL:PDB:REP 14->215|4tmkA|1e-27|40.4|198/210| RP:PDB:NREP 1 RP:PDB:REP 13->204|1e2mA|8e-13|14.4|187/305| RP:PFM:NREP 1 RP:PFM:REP 18->201|PF02223|3e-38|48.0|179/188|Thymidylate_kin| HM:PFM:NREP 1 HM:PFM:REP 18->211|PF02223|2.5e-47|39.2|186/186|Thymidylate_kin| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02223|IPR000062| RP:SCP:NREP 1 RP:SCP:REP 15->211|1g3uA|3e-48|26.7|195/208|c.37.1.1| HM:SCP:REP 11->218|1e2kA_|1.7e-58|40.8|201/0|c.37.1.1|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 810 OP:NHOMOORG 805 OP:PATTERN --1--------------111111111111111---11------1-11111111-1111111------- 11111-----------------------------------111111111111111111111111---11111111111111111-111--------------------1-1111111111111111111111111111111111111--1---1111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1----------1---1------111--11--1111111111111---11111111111111111111111111111111111-11112111111111111111111111111111111111111111111111111-111111111111111111131111111111-1111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111----1111---------------1-----1---111111111111111111111111111111111-1111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111--------111111111111-1----------111111-111111111111111111111-11111-1111 --------------11--1-------------------------------------1-----1------------------------------------------------------------------------------------------------------1--------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 217 STR:RPRED 86.1 SQ:SECSTR #####ccHHHGEEEEEEEcccccccHHHHHHcccccEEEEcccHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEccEEEEEEccTHHHHTHHHHTTcccHHHHHHHHHTcccccTTcEEEEEEccHHHHHHHHHTTccTTcccTTccccHHHHHHHHHHHHHHHHHHTTccHHHHGGGGTTTccHHHHHHHHHHHGcG############################## DISOP:02AL 1-10,159-163,226-253| PSIPRED cccccccccccccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHccccccccHHHHccHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccc //