[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39949.1
DDBJ      :             AMP-dependent synthetase and ligase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  664/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:549 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   86->543 1ultA PDBj 3e-49 34.8 %
:RPS:PDB   12->545 1ba3A PDBj 7e-67 18.2 %
:RPS:SCOP  17->546 1ultA  e.23.1.1 * 9e-72 33.2 %
:HMM:SCOP  23->544 1pg4A_ e.23.1.1 * 2.6e-149 35.7 %
:RPS:PFM   49->472 PF00501 * AMP-binding 4e-43 35.8 %
:HMM:PFM   49->473 PF00501 * AMP-binding 1.1e-91 31.9 407/418  
:BLT:SWISS 50->540 ALKK_PSEOL 8e-58 30.4 %
:PROS 191->202|PS00455|AMP_BINDING
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39949.1 GT:GENE ABE39949.1 GT:PRODUCT AMP-dependent synthetase and ligase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3035808..3037457) GB:FROM 3035808 GB:TO 3037457 GB:DIRECTION - GB:PRODUCT AMP-dependent synthetase and ligase GB:PROTEIN_ID ABE39949.1 GB:DB_XREF GI:91683647 InterPro:IPR000873 LENGTH 549 SQ:AASEQ MSSPQGHYSIGLDKTPANYVPLSPLSFLERTANVYPDLTSVVYEGRHYTWKETRARCRRFASWLVRNGIGRGDTVAAMLPNVPAMVEAHFAVPMAGAVLNGLNIRLDAPAIAFQLEHGGAKIILVDPEFAAVIADALKQMKGPKPLVIDVDDKMFPGSHRIGELEYEYAVASGDPSFAGERPKDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNILAANLGAHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVDPAKIFDLIRRHGVTHMAGAPIVYNALINAPEAPKGAAARPVVGLIAGAAPPVAVLAGGESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLSVADRAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAGGWFHTGDLGVLDPHGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKEGASATEAEIISYCREHLPGFKTPKSIMFSAIPKTSTGKIQKFMLRDQVKSAKAISD GT:EXON 1|1-549:0| BL:SWS:NREP 1 BL:SWS:REP 50->540|ALKK_PSEOL|8e-58|30.4|484/546| PROS 191->202|PS00455|AMP_BINDING|PDOC00427| SEG 302->320|pvvgliagaappvavlagg| SEG 437->448|iikdrskdiiis| BL:PDB:NREP 1 BL:PDB:REP 86->543|1ultA|3e-49|34.8|440/533| RP:PDB:NREP 1 RP:PDB:REP 12->545|1ba3A|7e-67|18.2|521/540| RP:PFM:NREP 1 RP:PFM:REP 49->472|PF00501|4e-43|35.8|399/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 49->473|PF00501|1.1e-91|31.9|407/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 17->546|1ultA|9e-72|33.2|518/533|e.23.1.1| HM:SCP:REP 23->544|1pg4A_|2.6e-149|35.7|507/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 7021 OP:NHOMOORG 897 OP:PATTERN 55-1--7GGGGHGFDB1162642J733321393231--323217666934433----1---242---- 1596M644444A4BPmVJJ-Jc55YeJJJJJJeahaTu**1V6U12122541829666--AAH2FEVLGL9--------386E224313333-3--1---11--21112-----------1111-43334423433988BC222D64-43333111111231-112551C2-1--21-11-2175555--1C9CDDDDDDCEAECECDC67998BDECAJDAB45222222I3244444444444444422341-1-11-1-----1111-1-123111---1---------------------------------------11---31111111-1-9-33------6--8115-A82261--A31111-1-411J88F-1---34YPW536ULXPN34443343444-A7E99I9C8EJ-422557576B55CF6859AC5866A9E--------B---1895-----------------------------1EEYE-4JIAGEGHJIIBBBBACBHNGGGE9FRCaWkla23HH99B9BAM9GIPO11A1-1-632222222211B673jJB6455333455-6874743533453DD99-121------1-2--------11131155-562645625344335745447464466--11763------53953216666677765-567666767767766666555654462645566666665655663445565--322222122121---2---1-223225724111111-111-1111667664579871BCCCAEBA9B9B98737222223232-1224333335215533222222222222--1---11----------2-------------------------------------221 ----8D5-133-559FGEAKBBAMGLLBB998A998FGBGDGGEEDA8ADFGJMABD6ACBAB-11-11-1111-111111----122-9E9GA98222242BFEI16C5J7C785D5243464I9394InC-8BD4433C53953433-A4-M5968LDEHBS9MDA7LE8CEC1324O63574GQPwCaf32E897D ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 538 STR:RPRED 98.0 SQ:SECSTR #######HHHHcEEccccccccccccHHHHHHHHHTTcEEEEETTcEEEHHHHHHHHHHHHHHHHHHTccTTcEEEEEccccccTHHHHHHHHHHTcEEEEccTTccHHHHHHHHHHHcccEEEEcGGGHHHHHHHHHHcTTccEEEEcccccccTTcEEHHHHHHHHHccTTccTTTcccccccTTTcEEEEEEcccccccEEEEEHHHHHHHHTcTTTcccccTTcEEEEcccTTcHHHHHHHHHHHHHTcEEEEcccccHHHHHHHHHHTTccEEEccHHHHHHHHHcccGGGcccTTccEEEcTTccccHHHHHHHHHHTTccccccEEEcGGGccEEEEccTTcccTTccHTTccccTTcccEEcTTcEEEEEcTTTcccccTTcEcEEEEEEcTTcccEETTcHHHHHHHcTTccEEEEEEEEEcTTccEEEccGGGccEEETTEEEcHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEEEcTTccccHHHHHHHHHTTccTTcccTTEEEccccccTTccccHHHHHHHHHHHc#### DISOP:02AL 1-5,543-550| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHccccEEEEEccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHccccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEcccccHHHHHHHHHHHcccEEEcHHHHHHHHHHccccccccccccHHHHHccccccEEEEEcccccccEEEEEcccHHHHHHHHHcccccccccccccHHHHccccccEEcccccEEEEEEccccccccccccEEEEEEEEcccHHcHHcccHHHHHHHHccccEEccEEEEEcccccEEEEcccccEEEcccEEEcHHHHHHHHHHcccEEEEEEEEccccccccEEEEEEEEcccccccHHHHHHHHHHcccccccccEEEEccccccccccccHHHHHHHHHHcccccc //