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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39962.1
DDBJ      :             Lytic transglycosylase, catalytic
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  106/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.2.1
:246 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   59->134 1a4vA PDBj 1e-13 7.9 %
:RPS:SCOP  60->180 1qsaA2  d.2.1.6 * 2e-13 24.8 %
:HMM:SCOP  59->204 1qsaA2 d.2.1.6 * 6e-34 39.0 %
:RPS:PFM   66->139 PF01464 * SLT 2e-09 48.6 %
:HMM:PFM   65->166 PF01464 * SLT 2.1e-23 39.2 102/121  
:BLT:SWISS 63->135 YJBJ_BACSU 8e-11 38.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39962.1 GT:GENE ABE39962.1 GT:PRODUCT Lytic transglycosylase, catalytic GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 3052493..3053233 GB:FROM 3052493 GB:TO 3053233 GB:DIRECTION + GB:PRODUCT Lytic transglycosylase, catalytic GB:PROTEIN_ID ABE39962.1 GB:DB_XREF GI:91683660 InterPro:IPR008258 LENGTH 246 SQ:AASEQ MAKFFAPRMILAVATAAAALIVANGAGQAQERLSDAAALLVVSTRPAAPSAFDAVSVSAPWAATIEQAAGENGLPPVFLRRLLHQESTMFNLAVSRAGAMGIAQFMPRTAAARGLDDPFDPQKAIPAAARYLSDLRRQFGNLGLAAAAYNAGSGRVSAWLSGTSELPAETRAYVMRITGFSAEDWAANKPDAAALRAAPPSAAIPQLHALKAEAGPKPSPKKKTTEAELCAAVSTAARACILQTVY GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 63->135|YJBJ_BACSU|8e-11|38.4|73/181| SEG 10->29|ilavataaaalivangagqa| SEG 140->154|gnlglaaaaynagsg| SEG 186->205|aankpdaaalraappsaaip| RP:PDB:NREP 1 RP:PDB:REP 59->134|1a4vA|1e-13|7.9|76/123| RP:PFM:NREP 1 RP:PFM:REP 66->139|PF01464|2e-09|48.6|74/113|SLT| HM:PFM:NREP 1 HM:PFM:REP 65->166|PF01464|2.1e-23|39.2|102/121|SLT| RP:SCP:NREP 1 RP:SCP:REP 60->180|1qsaA2|2e-13|24.8|121/168|d.2.1.6| HM:SCP:REP 59->204|1qsaA2|6e-34|39.0|146/168|d.2.1.6|1/1|Lysozyme-like| OP:NHOMO 142 OP:NHOMOORG 107 OP:PATTERN -------------------------------------------------------------------- -1---------------------------------------11-------------------1----------------------------------------------------------------------------------1----------------------------------------11---1----------------------1------1-----------------------------------------------------------------------------------------------------------------------------------11-----1----1----------1--1-------2121233221111-11-11-12-1143142132--111-1111111113-----5----------------34-1---------------------------------2211----------------------------------------------------1---1-----------1--------1---1-11--1-1---11-----1------------------------------11--------1--1111111111111-111--------------------------------------------------------1-----------------------------------------------------------------------------------1---------111-----------------------------11----------------11----------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 137 STR:RPRED 55.7 SQ:SECSTR ########################################cccHHHTccccEEHHHHHHHHHHHHGGGTTGGGccHHHHHHHHHHHHTTcTTcEEEccccEEETTTTEETTTTcccTTcTTcccTTcccGGGGcHHHHHHHTccGGGGcHHHHHHTTccGGcEEccTTccEEEEEEE##################################################################### DISOP:02AL 1-2,207-226| PSIPRED cccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcc //