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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39971.1
DDBJ      :             Collagen triple helix repeat
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:174 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   114->171 PF01391 * Collagen 2.2e-12 46.6 58/60  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39971.1 GT:GENE ABE39971.1 GT:PRODUCT Collagen triple helix repeat GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3063635..3064159) GB:FROM 3063635 GB:TO 3064159 GB:DIRECTION - GB:PRODUCT Collagen triple helix repeat GB:PROTEIN_ID ABE39971.1 GB:DB_XREF GI:91683669 InterPro:IPR008160 LENGTH 174 SQ:AASEQ MARRSILVGTAILMMTSGTAMALELDSLSIESGRLLIIGKTTKPNQEVEVVGTGDKVTSSSSRRFRFALSYLPETCKIDLKSGAETLTDRLIANCGPRGPKGEPGAAGPAGGAGSAGPAGPTGPAGPKGEAGPAGPAGPVGPAGPAGLRGDAGPAGPAGPAGPKGEPGEAAAKN GT:EXON 1|1-174:0| SEG 59->67|ssssrrfrf| SEG 96->172|gprgpkgepgaagpaggagsagpagptgpagpkgeagpagpagpvgpagpaglrgdagpagpagpagpkgepgeaaa| HM:PFM:NREP 1 HM:PFM:REP 114->171|PF01391|2.2e-12|46.6|58/60|Collagen| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,100-136,154-175| PSIPRED cccHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEcccccccEEEEEEcccccccccccEEEEEHHHcccEEEEEEcccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccc //