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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39984.1
DDBJ      :             putative outer membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.4.1
:241 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   40->234 1bxwA PDBj 1e-06 17.1 %
:RPS:SCOP  76->201 1qjpA  f.4.1.1 * 1e-13 17.5 %
:HMM:SCOP  39->239 1g90A_ f.4.1.1 * 3e-29 29.9 %
:RPS:PFM   43->201 PF01389 * OmpA_membrane 2e-06 34.0 %
:HMM:PFM   38->234 PF01389 * OmpA_membrane 1.1e-10 25.4 177/200  
:HMM:PFM   2->48 PF02530 * Porin_2 5.4e-05 36.2 47/402  
:BLT:SWISS 76->233 OM31_BRUSU 1e-12 33.1 %
:TM
:REPEAT 2|45->89|96->139
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39984.1 GT:GENE ABE39984.1 GT:PRODUCT putative outer membrane protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 3076065..3076790 GB:FROM 3076065 GB:TO 3076790 GB:DIRECTION + GB:PRODUCT putative outer membrane protein GB:PROTEIN_ID ABE39984.1 GB:DB_XREF GI:91683682 LENGTH 241 SQ:AASEQ MKKFLLGSVALIALGAAPAMAADLAARPYAKAPPIIAAVYDWSGFYIGANGGWGTSRKSWDFYTVGGLAAEGSHDASGATAGGQIGYNWQAGSWVFGLEAQGNWADFKGSNVTLLGGLFDNQSRIDAFGLFTGRVGYAWNNALLYAKGGAAVVNDKYDFIRRADGFVTGTASETRWGAAVGAGFEYGFTPNWSFAVEYDHLFLDKKDVTFTNTAVERIKQDADIVTARINYRWGGPVVARY GT:EXON 1|1-241:0| BL:SWS:NREP 1 BL:SWS:REP 76->233|OM31_BRUSU|1e-12|33.1|154/240| TM:NTM 1 TM:REGION 4->26| NREPEAT 1 REPEAT 2|45->89|96->139| SEG 10->26|alialgaapamaadlaa| RP:PDB:NREP 1 RP:PDB:REP 40->234|1bxwA|1e-06|17.1|170/172| RP:PFM:NREP 1 RP:PFM:REP 43->201|PF01389|2e-06|34.0|144/188|OmpA_membrane| HM:PFM:NREP 2 HM:PFM:REP 38->234|PF01389|1.1e-10|25.4|177/200|OmpA_membrane| HM:PFM:REP 2->48|PF02530|5.4e-05|36.2|47/402|Porin_2| GO:PFM:NREP 2 GO:PFM GO:0009279|"GO:cell outer membrane"|PF01389|IPR000498| GO:PFM GO:0016021|"GO:integral to membrane"|PF01389|IPR000498| RP:SCP:NREP 1 RP:SCP:REP 76->201|1qjpA|1e-13|17.5|120/137|f.4.1.1| HM:SCP:REP 39->239|1g90A_|3e-29|29.9|174/0|f.4.1.1|1/1|OMPA-like| OP:NHOMO 233 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------24MDE685A79B944454554553-11111-2D26--422-1213321158-----------------------------------------------------------------------------------------------------------------1--------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 182 STR:RPRED 75.5 SQ:SECSTR #######################################ccTTcEEEEEEEEEEccccccccccccc######ccccEEEEEEEEEEEEETTEEEEEEEEEEEEcccc#######cccccccEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEccTTTccEccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEcccccccccccEcTTcccccccEEEEEEEEEEc####### PSIPRED cHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccEEEEEEEEEEEEEEccccccccccccccccccccEEEEEEEEEEEEccccEEEEEEEEEEEccccccccEEcccEEEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEEEcccccccccccccEEEEEEEEEEEEEccccEEEEEEEEEEEccccEEEEccccEEEEEEEEEEEEEEEEEEEcccEEccc //