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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39988.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  18/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.118.8d.157.1
:445 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   212->287 2p9kD PDBj 4e-04 29.3 %
:RPS:PDB   196->341 2axzB PDBj 6e-08 6.0 %
:RPS:SCOP  197->304 2cfuA2  d.157.1.13 * 1e-04 10.8 %
:HMM:SCOP  76->239 2fbnA1 a.118.8.1 * 3e-05 29.5 %
:HMM:SCOP  197->392 1qqeA_ a.118.8.1 * 1.5e-06 20.8 %
:RPS:PFM   225->299 PF02520 * DUF148 6e-04 29.3 %
:HMM:PFM   185->263 PF09577 * Spore_YpjB 0.00013 15.4 78/232  
:BLT:SWISS 197->348 TTC28_HUMAN 3e-04 28.8 %
:REPEAT 3|121->158|308->345|355->392
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39988.1 GT:GENE ABE39988.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 3080809..3082146 GB:FROM 3080809 GB:TO 3082146 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABE39988.1 GB:DB_XREF GI:91683686 LENGTH 445 SQ:AASEQ MRTKALELLDAGDFSGAYSALEEGRLLAQAHRCEASVSEAELLADQGRVLELQISNIPASEKYAQAALLSAGNPISAFEYLVKQANALQNEGEEFGNKGALRESILIWRKAKTLAPFEIAPDRHRKAHNNLGSAVYSLALLEPTNENLLEVAKMNREVLDRDSCDIAPQVWIAAQANLASTLLELGERELGTDKLMEALERFNIALSAIDRKERPADWAGIKNNIGNTLMRIGQRQARSDYFDRAIGAFHEAFEALDPTMECNRAMILMNLAAVHADLGRLLNRAEPLEQSIKDAEAALALTQKSRYPVRWAQIKNNIGSARSSLGLITNDISHWQDAIVVNREALSVHTIEHAPLKWAMSQWGIGLALSKIAATTSDLQAATEAVAILNEAHLIIAKSDNESMKMGVVGALTEAKDLAIGLQNRASYKVEEASPLADKLAMPPR GT:EXON 1|1-445:0| BL:SWS:NREP 1 BL:SWS:REP 197->348|TTC28_HUMAN|3e-04|28.8|146/100| NREPEAT 1 REPEAT 3|121->158|308->345|355->392| SEG 182->191|llelgerelg| BL:PDB:NREP 1 BL:PDB:REP 212->287|2p9kD|4e-04|29.3|75/277| RP:PDB:NREP 1 RP:PDB:REP 196->341|2axzB|6e-08|6.0|133/299| RP:PFM:NREP 1 RP:PFM:REP 225->299|PF02520|6e-04|29.3|75/113|DUF148| HM:PFM:NREP 1 HM:PFM:REP 185->263|PF09577|0.00013|15.4|78/232|Spore_YpjB| RP:SCP:NREP 1 RP:SCP:REP 197->304|2cfuA2|1e-04|10.8|83/502|d.157.1.13| HM:SCP:REP 76->239|2fbnA1|3e-05|29.5|132/0|a.118.8.1|1/2|TPR-like| HM:SCP:REP 197->392|1qqeA_|1.5e-06|20.8|183/290|a.118.8.1|1/1|TPR-like| OP:NHOMO 36 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------1-------1--13--------------2139-----------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1---------1---------------------------2--------1-------------------3---1--------------------1-----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- --------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 76.2 SQ:SECSTR ######################################cHHHHHHHHHHHHHTTcHHHHHHHHHHHH###TTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH########HHHTTTTTccTTcHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHGGccccccccHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHTTcTTcccHHHcTccHHHHHHHHHHHHHHHHHHTccHTccTHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHTTccccccccccEcccEEcHHHHTTccEEEEEEETTTTEEEHHHHHTcccccHHHHHHHHHHHHHH######################################################### DISOP:02AL 1-1,442-446| PSIPRED ccHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccc //