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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40015.1
DDBJ      :             seryl-tRNA synthetase
Swiss-Prot:SYS_RHOPS    RecName: Full=Seryl-tRNA synthetase;         EC=6.1.1.11;AltName: Full=Seryl-tRNA(Ser/Sec) synthetase;AltName: Full=Serine--tRNA ligase;         Short=SerRS;

Homologs  Archaea  55/68 : Bacteria  910/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
a.2.7d.104.1
:434 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->426 2dq3A PDBj e-104 51.6 %
:RPS:PDB   1->431 2dq0A PDBj e-105 40.2 %
:RPS:SCOP  118->431 1serA2  d.104.1.1 * 3e-58 38.5 %
:HMM:SCOP  1->114 1setA1 a.2.7.1 * 3.2e-32 46.4 %
:HMM:SCOP  115->432 1setA2 d.104.1.1 * 6e-94 45.0 %
:RPS:PFM   1->108 PF02403 * Seryl_tRNA_N 5e-13 43.4 %
:RPS:PFM   174->344 PF00587 * tRNA-synt_2b 6e-20 33.5 %
:HMM:PFM   174->349 PF00587 * tRNA-synt_2b 4.4e-39 27.1 170/173  
:HMM:PFM   1->109 PF02403 * Seryl_tRNA_N 8.7e-30 47.7 107/108  
:BLT:SWISS 1->434 SYS_RHOPS 0.0 100.0 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40015.1 GT:GENE ABE40015.1 GT:PRODUCT seryl-tRNA synthetase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3104320..3105624) GB:FROM 3104320 GB:TO 3105624 GB:DIRECTION - GB:PRODUCT seryl-tRNA synthetase GB:PROTEIN_ID ABE40015.1 GB:DB_XREF GI:91683713 InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195 LENGTH 434 SQ:AASEQ MHDIKAIRDNPTAFDAAYTRRGLSPIADSLIKLDETRRIAILASEQAQARRNAASKEIGEAKKAKDNARAEVLMAEVAELKTTMPALEAAVKDADEALKTALSEIPNLPLADVPEGADEHGNVERHHFGAKRSYTFTPKAHDDLGEALGMMDFEAAAKLSGARFVVLKNGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFRDDQFAAGAIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEKSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARSRGPDGKPRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDVLLPYMGGLKVIAAA GT:EXON 1|1-434:0| SW:ID SYS_RHOPS SW:DE RecName: Full=Seryl-tRNA synthetase; EC=6.1.1.11;AltName: Full=Seryl-tRNA(Ser/Sec) synthetase;AltName: Full=Serine--tRNA ligase; Short=SerRS; SW:GN Name=serS; OrderedLocusNames=RPD_2787; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->434|SYS_RHOPS|0.0|100.0|434/434| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 44->72| BL:PDB:NREP 1 BL:PDB:REP 3->426|2dq3A|e-104|51.6|411/422| RP:PDB:NREP 1 RP:PDB:REP 1->431|2dq0A|e-105|40.2|420/447| RP:PFM:NREP 2 RP:PFM:REP 1->108|PF02403|5e-13|43.4|106/107|Seryl_tRNA_N| RP:PFM:REP 174->344|PF00587|6e-20|33.5|164/170|tRNA-synt_2b| HM:PFM:NREP 2 HM:PFM:REP 174->349|PF00587|4.4e-39|27.1|170/173|tRNA-synt_2b| HM:PFM:REP 1->109|PF02403|8.7e-30|47.7|107/108|Seryl_tRNA_N| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02403|IPR015866| GO:PFM GO:0004828|"GO:serine-tRNA ligase activity"|PF02403|IPR015866| GO:PFM GO:0005524|"GO:ATP binding"|PF02403|IPR015866| GO:PFM GO:0005737|"GO:cytoplasm"|PF02403|IPR015866| GO:PFM GO:0006412|"GO:translation"|PF02403|IPR015866| GO:PFM GO:0006434|"GO:seryl-tRNA aminoacylation"|PF02403|IPR015866| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| RP:SCP:NREP 1 RP:SCP:REP 118->431|1serA2|3e-58|38.5|304/311|d.104.1.1| HM:SCP:REP 1->114|1setA1|3.2e-32|46.4|110/110|a.2.7.1|1/1|tRNA-binding arm| HM:SCP:REP 115->432|1setA2|6e-94|45.0|307/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1444 OP:NHOMOORG 1159 OP:PATTERN 1111111111111111111111111111111111---------1-111--111-11111111111111 1111111111111111111-11111111111111111111111211111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111221111111211111111111111211111111111111111111211111111112211111111111111111111111111111111111111111111111111111111111121222222212112111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111-11111111111111111111111111111111 2111222141112222222222222222221222222222222222322223232222222222222212222222222122222222-24222222222222334122263224312122-2244-225M2-2351122322211221122132111322423221221-22122222N2222243742422242222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 432 STR:RPRED 99.5 SQ:SECSTR cccHHHHHHcHHHHHHHHHHHTcGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccTTccccccGGGcEEEEEEccEEEEGcccccHHHHHHHTTcEEcHHHHHHTcTTccEEcHHHHHHHHHHHHHHHHHHHTHTTcEEEccccEEcHHHHHTTccTTHHHHTccccTTccccTcccEEcccTHHHHHHTTTTEEEETTTccEEEEEEEEEEcccTTcccccccccccccEEEEEEEEEEEcTTTHHHHHHHHHHHHHHHHHHTTccEEEEEccGGGccccccEEEEEEEEETTTTETTEEEEEEEEEEcTTTTHHHHTEEEEccTTccEEcEEEEEEEEEHHHHHHHHHHHcccTTccEEccGGGHHHHcccEEcc## DISOP:02AL 49-77,434-435| PSIPRED cccHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEccccccccccccHHHHHHHccccccccHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHccccccccccEEEEEEcccccccEEEEcccHHHHHHHHHcccccHHHccEEEEccccEEcccccccccccccccEEHHEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEEHHHHHccccccccEEEcccHHHHHHHHHHHcccEEEcccccccccEEccccHHHHHHHHHHHHHHHccccccEEccHHHccccccccccccc //