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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40023.1
DDBJ      :             arginyl-tRNA synthetase
Swiss-Prot:SYR_RHOP2    RecName: Full=Arginyl-tRNA synthetase;         EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase;         Short=ArgRS;

Homologs  Archaea  57/68 : Bacteria  861/915 : Eukaryota  115/199 : Viruses  0/175   --->[See Alignment]
a.27.1c.26.1d.67.2
:597 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   51->114 3gdzD PDBj 9e-05 38.7 %
:BLT:PDB   129->551 3fnrA PDBj 2e-61 35.5 %
:RPS:PDB   1->596 1bs2A PDBj 2e-52 19.4 %
:RPS:SCOP  30->111 1iq0A3  d.67.2.1 * 5e-18 23.8 %
:RPS:SCOP  123->471 1bs2A2  c.26.1.1 * 2e-54 19.8 %
:RPS:SCOP  460->596 1iq0A1  a.27.1.1 * 1e-31 38.3 %
:HMM:SCOP  7->121 1bs2A3 d.67.2.1 * 4.8e-29 42.3 %
:HMM:SCOP  122->473 1bs2A2 c.26.1.1 * 2.2e-79 37.8 %
:HMM:SCOP  455->596 1iq0A1 a.27.1.1 * 1.6e-35 38.9 %
:RPS:PFM   25->101 PF03485 * Arg_tRNA_synt_N 1e-17 55.8 %
:RPS:PFM   122->428 PF00750 * tRNA-synt_1d 1e-43 43.7 %
:RPS:PFM   461->596 PF05746 * DALR_1 4e-22 50.8 %
:HMM:PFM   110->432 PF00750 * tRNA-synt_1d 3.1e-61 30.2 301/354  
:HMM:PFM   461->596 PF05746 * DALR_1 4e-35 46.2 119/119  
:HMM:PFM   34->101 PF03485 * Arg_tRNA_synt_N 3.6e-25 51.5 68/83  
:BLT:SWISS 1->597 SYR_RHOP2 0.0 91.3 %
:PROS 140->149|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40023.1 GT:GENE ABE40023.1 GT:PRODUCT arginyl-tRNA synthetase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3112629..3114422) GB:FROM 3112629 GB:TO 3114422 GB:DIRECTION - GB:PRODUCT arginyl-tRNA synthetase GB:PROTEIN_ID ABE40023.1 GB:DB_XREF GI:91683721 InterPro:IPR001278 InterPro:IPR001412 InterPro:IPR005148 InterPro:IPR008909 LENGTH 597 SQ:AASEQ MPDQPISTHLFAHVLARVHAVCAVLTDEGVLPAGINLARIVVEPPKDASHGDMATNAAMVLAKDAKAKPRDLANKIAEKLRAEDQIAEVAIAGPGFINLTLKPAVWAQALRAVLDEGSAYGRSRVGGSEKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDAAGYDVTREYYINDAGAQVDVLARSAFLRYREALGEDIGAIPDGLYPGDYLVPVGAELAAEHGSALKEMPDSQWLPLVRAKSIAMMMEMIKGDLAALAITHEVFFSERSLIEGDRNRVADTIDFLRAKGDVYQGRLPPPKGAPVEDYEDREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFGNMVDVWGADHGGYIKRMQAAITAVTEGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREAFPDLPESTDARIAFLKDAKTERLTDPAELDLLRRLALFPRTVEAAALAHEPHRVAFYLYDLASEFHALWTRGRDLPHLRFIINNDAEITKARLAMVQGVVSVLASGLAMLGVTAPDEMR GT:EXON 1|1-597:0| SW:ID SYR_RHOP2 SW:DE RecName: Full=Arginyl-tRNA synthetase; EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase; Short=ArgRS; SW:GN Name=argS; OrderedLocusNames=RPB_2750; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->597|SYR_RHOP2|0.0|91.3|597/597| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 140->149|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 156->165|dalanlldaa| BL:PDB:NREP 2 BL:PDB:REP 51->114|3gdzD|9e-05|38.7|62/101| BL:PDB:REP 129->551|3fnrA|2e-61|35.5|386/449| RP:PDB:NREP 1 RP:PDB:REP 1->596|1bs2A|2e-52|19.4|563/603| RP:PFM:NREP 3 RP:PFM:REP 25->101|PF03485|1e-17|55.8|77/85|Arg_tRNA_synt_N| RP:PFM:REP 122->428|PF00750|1e-43|43.7|284/350|tRNA-synt_1d| RP:PFM:REP 461->596|PF05746|4e-22|50.8|118/118|DALR_1| HM:PFM:NREP 3 HM:PFM:REP 110->432|PF00750|3.1e-61|30.2|301/354|tRNA-synt_1d| HM:PFM:REP 461->596|PF05746|4e-35|46.2|119/119|DALR_1| HM:PFM:REP 34->101|PF03485|3.6e-25|51.5|68/83|Arg_tRNA_synt_N| GO:PFM:NREP 15 GO:PFM GO:0000166|"GO:nucleotide binding"|PF03485|IPR005148| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF03485|IPR005148| GO:PFM GO:0005524|"GO:ATP binding"|PF03485|IPR005148| GO:PFM GO:0005737|"GO:cytoplasm"|PF03485|IPR005148| GO:PFM GO:0006412|"GO:translation"|PF03485|IPR005148| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF03485|IPR005148| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00750|IPR015945| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF00750|IPR015945| GO:PFM GO:0005524|"GO:ATP binding"|PF00750|IPR015945| GO:PFM GO:0005737|"GO:cytoplasm"|PF00750|IPR015945| GO:PFM GO:0006412|"GO:translation"|PF00750|IPR015945| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF00750|IPR015945| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF05746|IPR008909| GO:PFM GO:0005524|"GO:ATP binding"|PF05746|IPR008909| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF05746|IPR008909| RP:SCP:NREP 3 RP:SCP:REP 30->111|1iq0A3|5e-18|23.8|80/96|d.67.2.1| RP:SCP:REP 123->471|1bs2A2|2e-54|19.8|323/348|c.26.1.1| RP:SCP:REP 460->596|1iq0A1|1e-31|38.3|120/126|a.27.1.1| HM:SCP:REP 7->121|1bs2A3|4.8e-29|42.3|111/131|d.67.2.1|1/1|Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain| HM:SCP:REP 122->473|1bs2A2|2.2e-79|37.8|320/348|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 455->596|1iq0A1|1.6e-35|38.9|126/126|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| OP:NHOMO 1081 OP:NHOMOORG 1033 OP:PATTERN 1111-111-------11-1111-111111111111111111111111111111111111111111-11 111121111111111-111-11111111111111111111112111111111112111111111111111111111111111111111111--1111---------111-1111-111111111111111111111-11-111111111111111111-1111111111111-11111--11111---111-1122222122222222221111122211111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111-1111111111111111112-11-1111111111111111111111111111111111112111111111111111111111-11112111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111---11111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--1111111111111111111111111111111111-1111111111111111111111111-11111111111111111111111111111111111111111111111--------11-----1-11111111111111111111111111111111 ----1-1-----111--1----------------1--111111-----11----1-111---1-1111112111111-11111111--------1-111-11-111--3-2-211121-1--1111-11161-1111-1-1-11111---1--112112132121--11111-12111131111--------1111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 596 STR:RPRED 99.8 SQ:SECSTR cTTccTTTcHHHHHHHHHHHHHHHccccHHHHHccccEEHHccccccGGGccEEEEGGGGccTHHTccHHHHHHHHHHHcccTTTEEEEEEETTEEEEEEcHHHHHHHHHHHHHHHGGGTTccccccccEEEEEcccccTTccccHHHHHHHHHHHHHHHHHHHTTcEEEEEcccccccHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccTTTcHHHHHHHHHTTcccccTTTTTTHHHHHHHHHHHHHHHHHHTTcccccccccTTccHHHHHHHHHHHHHHHHHTcccccTTcEEEEGGGTcTTccEEEEEETTTEEcHHHHHHHHHHHHHHHcccEEEEEccGGGHHHHHHHHHHHHHccEEcccccTTcccccHHHHHHHHHHHHHHcTTTccccHHHHHHHHHHHHHHHHcccTTccEEccHHHHHccccccHHcHHHHHHHHHHHHHccccTTHHHHHHTccGHHHHHHHHcTGGcccHHHHHHHHHHHTHHHHHHHHHHHTcTHHHHHHHHHHHHHHHHHHHHHcHHHHHcccTTccHHHHHHHHHHHHHHHHHHHHHHHHHTccccccc# DISOP:02AL 1-4,6-6,400-413,597-598| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHEEEEcccccccccEEcHHHHHHHHHccccHHHHHHHHHHHcccccccccEEcccccEEEEEEcHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHHHHHHHHHHccccccccHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccEEEEccccccccccEEEEccccHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHccccccEEEcHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcc //