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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40035.1
DDBJ      :             dihydrolipoamide dehydrogenase
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  865/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.80.6c.3.1d.87.1
:473 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->472 1lpfA PDBj 7e-92 43.9 %
:RPS:PDB   2->472 1bhyA PDBj 7e-90 30.9 %
:RPS:SCOP  6->234 1vh4A  b.80.6.1 * 2e-33 11.3 %
:RPS:SCOP  350->470 1aogA3  d.87.1.1 * 1e-37 23.1 %
:HMM:SCOP  1->346 1gpeA1 c.3.1.2 * 1.5e-69 32.4 %
:HMM:SCOP  351->472 1mo9A3 d.87.1.1 * 4.1e-39 48.4 %
:RPS:PFM   7->321 PF07992 * Pyr_redox_2 8e-23 42.2 %
:RPS:PFM   354->463 PF02852 * Pyr_redox_dim 4e-28 50.9 %
:HMM:PFM   7->322 PF07992 * Pyr_redox_2 2.7e-50 46.4 194/202  
:HMM:PFM   354->462 PF02852 * Pyr_redox_dim 3.2e-41 50.5 109/110  
:BLT:SWISS 6->472 DLDH_ZYMMO e-141 55.2 %
:PROS 40->50|PS00076|PYRIDINE_REDOX_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40035.1 GT:GENE ABE40035.1 GT:PRODUCT dihydrolipoamide dehydrogenase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3128487..3129908) GB:FROM 3128487 GB:TO 3129908 GB:DIRECTION - GB:PRODUCT dihydrolipoamide dehydrogenase GB:PROTEIN_ID ABE40035.1 GB:DB_XREF GI:91683733 InterPro:IPR000103 InterPro:IPR000205 InterPro:IPR000815 InterPro:IPR001100 InterPro:IPR001327 InterPro:IPR003042 InterPro:IPR003953 InterPro:IPR004099 InterPro:IPR006076 InterPro:IPR006258 InterPro:IPR012999 InterPro:IPR013027 LENGTH 473 SQ:AASEQ MSDTAFDVIIIGSGPGGYVAAIRAAQLGFKTAIVEKSYLGGICLNWGCIPTKALLRSAEIYHYMQHAKDYGLSADNVSFDPKAVVARSRGVSKRLNDGVGFLMKKNKISIIWGAATIDAPGKVTVAASKTEAPKGALPPGSYQAKHIILATGARPRVLPGLEPDQKLVWTYFEAMVPEKMPKSLLVVGSGAIGIEFASFFHTMGAKVTVVEVLPQILPVEDAEIAGLARKRFEKQGITIMTGAKVTRLDKKADSVVATIDPGNGKPETQEFDRVISAVGVVGNVENLGLEKLGLKIERGTIVTDGLGRTSVPGVYAIGDVAGPPMLAHKAEHEGVICVEAIKGLHPHPLDKKLIPGCTYCNPQIASVGLTEAKAKEEGREIRVGRFPFAGNGKAIALGEDQGLVKVIFDKKTGQLLGAHMIGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGQVLNA GT:EXON 1|1-473:0| BL:SWS:NREP 1 BL:SWS:REP 6->472|DLDH_ZYMMO|e-141|55.2|460/466| PROS 40->50|PS00076|PYRIDINE_REDOX_1|PDOC00073| SEG 278->290|vgvvgnvenlgle| BL:PDB:NREP 1 BL:PDB:REP 6->472|1lpfA|7e-92|43.9|456/472| RP:PDB:NREP 1 RP:PDB:REP 2->472|1bhyA|7e-90|30.9|470/482| RP:PFM:NREP 2 RP:PFM:REP 7->321|PF07992|8e-23|42.2|263/275|Pyr_redox_2| RP:PFM:REP 354->463|PF02852|4e-28|50.9|110/110|Pyr_redox_dim| HM:PFM:NREP 2 HM:PFM:REP 7->322|PF07992|2.7e-50|46.4|194/202|Pyr_redox_2| HM:PFM:REP 354->462|PF02852|3.2e-41|50.5|109/110|Pyr_redox_dim| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 2 RP:SCP:REP 6->234|1vh4A|2e-33|11.3|212/410|b.80.6.1| RP:SCP:REP 350->470|1aogA3|1e-37|23.1|121/130|d.87.1.1| HM:SCP:REP 1->346|1gpeA1|1.5e-69|32.4|327/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 351->472|1mo9A3|4.1e-39|48.4|122/140|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 4075 OP:NHOMOORG 1117 OP:PATTERN 221-1153555645652231311441121251222111----12212111332221-11-23441--- 4456743344533394566-8611876666635444379835464545455256A444335494655553212222221-123131114441-42212222227333232111111111111113131222112123331211122344444412332222232224547422222222222232244221153444444342445434353343444242327654444455233333333333333385644241541322257332335565244664454445544444334444433333333333335653335554224--3333232131-5221-1132--13-1--31-41134125542123216533533333367343444343355565445555-4454653668435554669777773A56556445445753333333353324343223222222211222222222222222221535724545867776864444663555553456648582245434356535552365311133333333346364223532432435222-324235331333344-3111-------------------112673447754535722222252422332223331-1664511111143335334445455544-4444455444454343445555333334444454444364445533333343145555555555511331111144542475522222222222222254445345543356675555455565433444445344344454444463433433434422222222231443333--------11422212-1-32211222132123---2111321232541 4411225-D55-2222222122223222222222212222212221333334472223222222222222222234323422222222-53222222222222425-39475734465334562CA1E2Q*9-B5J3321944653554354483765659E35421533756854664*44455666B2949A88677 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 473 STR:RPRED 100.0 SQ:SECSTR TcEEEEEEEEEcccHHHHHHHHHHHHTTccEEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHGGGGTcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEcccEEEcccccccccTTEEcHHHHTTccccccEEEEEcccHHHHHHHHHHHHHTcEEEEEcccccccTTccHHHHHHHHHHHGGGEEEEEcccEEEEEEEETTEEEEEEEccccccccEEEccEEEcccEEEcGGGTTGGGTTcccTTccccccTTcccccTTEEEcGGGTcccccHHHHHHHHHHHHHHHTTccccccccccccEEEcccccEEEEEccHHHHHHHTccEEEEEEEGGGcHHHHHTTccccEEEEEEETTTccEEEEEEEcTTHHHHHHHHHHHHHTTccHHHHHTccccccccTTHHHHHHHHHHTccTTc DISOP:02AL 1-1,473-474| PSIPRED cccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccEEEEEcccccHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEcccEEEEEccccEEEEccEEEEEcccccEEccccccccEEEEcHHHHHcHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEEcccccEEEEEEcEEEEEEEEEccHHHccHHHccEEEcccEEEEccEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHccccccccccccEEEEEEccccEEEEcccHHHHHHccccEEEEEEEcccccEEEEcccccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHcccccc //