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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40039.1
DDBJ      :             Transketolase, central region
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  723/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
b.84.1c.36.1c.48.1
:469 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->78 1y8nB PDBj 1e-21 56.6 %
:BLT:PDB   147->454 2ozlB PDBj e-106 60.7 %
:RPS:PDB   3->77 3crkD PDBj 1e-12 55.4 %
:RPS:PDB   146->455 1dtwB PDBj 5e-67 36.5 %
:RPS:SCOP  5->65 2pnrC1  b.84.1.1 * 1e-13 60.7 %
:RPS:SCOP  143->330 1dtwB1  c.36.1.7 * 8e-47 34.8 %
:RPS:SCOP  325->454 1ay0A3  c.48.1.1 * 1e-28 15.5 %
:HMM:SCOP  1->99 1y8oB1 b.84.1.1 * 1.2e-28 42.4 %
:HMM:SCOP  143->347 1qs0B1 c.36.1.7 * 6.5e-72 43.6 %
:HMM:SCOP  331->467 1umdB2 c.48.1.2 * 4.1e-44 49.6 %
:RPS:PFM   8->77 PF00364 * Biotin_lipoyl 8e-09 47.8 %
:RPS:PFM   150->315 PF02779 * Transket_pyr 1e-18 39.6 %
:RPS:PFM   339->448 PF02780 * Transketolase_C 6e-24 52.7 %
:HMM:PFM   147->321 PF02779 * Transket_pyr 6.7e-55 38.0 171/178  
:HMM:PFM   337->458 PF02780 * Transketolase_C 2.3e-44 58.2 122/124  
:HMM:PFM   4->77 PF00364 * Biotin_lipoyl 3.3e-24 38.4 73/74  
:HMM:PFM   83->150 PF10152 * DUF2360 0.00032 29.4 68/148  
:BLT:SWISS 1->469 ODPB_RHIME e-178 74.3 %
:PROS 27->56|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40039.1 GT:GENE ABE40039.1 GT:PRODUCT Transketolase, central region GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3132132..3133541) GB:FROM 3132132 GB:TO 3133541 GB:DIRECTION - GB:PRODUCT Transketolase, central region GB:PROTEIN_ID ABE40039.1 GB:DB_XREF GI:91683737 InterPro:IPR000089 InterPro:IPR003016 InterPro:IPR005475 InterPro:IPR005476 LENGTH 469 SQ:AASEQ MPIQVLMPALSPTMEKGNLSKWLKKEGDKVKSGDVIAEIETDKATMEVEAADEGTLGKILIPEGTNDVAVNTPIATILGDGESASDADKAAEPAAQNKSAQSAPPAAAPEAGEAKSAPVPAQDAPEAPAVSVADDPDIPAGTEMVTVTIREALRDAMAEEMRRDPDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVIDTPITEHGFAGVGVGAAMTGLKPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQLGCSIVFRGPNGAASRVAAQHSQDYSSWYAQIPGLKVVAPSTAADYKGLLKAAIRDPNPVIFLEHEMMYGQSGEVPKLDDYVIPIGKARVARQGQHVTLISWSHGMSYALKAAEELAKDGIEAEVIDLRTLRPLDTETIIASVKKTGRAVAIEEGWQQNGVGAEIAARIMEHAFDYLDAPVARVSGKDVPMPYAANLEKLALPSVAEVVEAAKAVCYR GT:EXON 1|1-469:0| BL:SWS:NREP 1 BL:SWS:REP 1->469|ODPB_RHIME|e-178|74.3|460/460| PROS 27->56|PS00189|LIPOYL|PDOC00168| SEG 82->118|esasdadkaaepaaqnksaqsappaaapeageaksap| SEG 456->466|vaevveaakav| BL:PDB:NREP 2 BL:PDB:REP 3->78|1y8nB|1e-21|56.6|76/97| BL:PDB:REP 147->454|2ozlB|e-106|60.7|308/330| RP:PDB:NREP 2 RP:PDB:REP 3->77|3crkD|1e-12|55.4|74/77| RP:PDB:REP 146->455|1dtwB|5e-67|36.5|307/326| RP:PFM:NREP 3 RP:PFM:REP 8->77|PF00364|8e-09|47.8|69/74|Biotin_lipoyl| RP:PFM:REP 150->315|PF02779|1e-18|39.6|159/172|Transket_pyr| RP:PFM:REP 339->448|PF02780|6e-24|52.7|110/122|Transketolase_C| HM:PFM:NREP 4 HM:PFM:REP 147->321|PF02779|6.7e-55|38.0|171/178|Transket_pyr| HM:PFM:REP 337->458|PF02780|2.3e-44|58.2|122/124|Transketolase_C| HM:PFM:REP 4->77|PF00364|3.3e-24|38.4|73/74|Biotin_lipoyl| HM:PFM:REP 83->150|PF10152|0.00032|29.4|68/148|DUF2360| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02780|IPR005476| GO:PFM GO:0008152|"GO:metabolic process"|PF02780|IPR005476| RP:SCP:NREP 3 RP:SCP:REP 5->65|2pnrC1|1e-13|60.7|61/61|b.84.1.1| RP:SCP:REP 143->330|1dtwB1|8e-47|34.8|187/188|c.36.1.7| RP:SCP:REP 325->454|1ay0A3|1e-28|15.5|129/146|c.48.1.1| HM:SCP:REP 1->99|1y8oB1|1.2e-28|42.4|99/0|b.84.1.1|1/1|Single hybrid motif| HM:SCP:REP 143->347|1qs0B1|6.5e-72|43.6|204/204|c.36.1.7|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 331->467|1umdB2|4.1e-44|49.6|135/137|c.48.1.2|1/1|TK C-terminal domain-like| OP:NHOMO 3036 OP:NHOMOORG 952 OP:PATTERN 11-1--214424433--1112---2111-111----1--1--------------11-1112222--11 21415-------2-22211-1---421111113333359554361222111164622411443123A2323-------1121A11-311111-1--3235444657534733333333333333222112122242788441113633233333333333233333423324333422433333324432153533333333233333338557433357634322333226422222222222222223332211-22-1--1111111111111222333333315511111-111113333333333333233333333321111444444414224332111--3--3-222223112122-33423-352-733433333555554333323366665554575-33333634563253335495446547434558455465533333333365224242222222222--33333333333332222147F52-21215443543111133361111-4324342211321111-1114441--22--1-2---1---111231124251---12----54525672311213314----------------------2224411111-221142211132111112111134---31--1--1111-1-1-1------11--------11----1------1233--2311-----------------------1111-1111-1111-113333222222-12-1---211-111111112222212---3133331332133431-21111111111----2-----11-113311111222----1-21334454----------111111-1-11111111111111----1----1-1-232 33--334-934-3333444333333333333333333433333333444544544444444443333333333333323333333323-4444565544444354513C5A5854574444464963A2Iy7-A7G4345635B6444466446396566BE57562C33O43646676*65565ACJD4A97875556 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 401 STR:RPRED 85.5 SQ:SECSTR cEEEEEcccccccccEEEEEEccccTTcEEcTTcEEEEEEccccEEEEEccccEEEEEccccTTcccEETTcEEEEEEccH######################################################cccccEEEEcEccHHHHHHHHHHHHHHHcTTcEEEETTTTTTTcTTcTTTTHHHHHcTTTEEEccccHHHHHHHHHHHHHTTccEEEEcccGGGcGGGHHHHHTTGGGHHHHTTcccccTEEEEEEEcccTTcTTcccccTHHHHHTcTTcEEEccccHHHHHHHHHHHHHccccEEEEEEGGGTTccccEEEcccccccTTccEEEEccccEEEEEcTTHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHccEEEEEEEEcTTcTHHHHHHHHHHHcTTTcccccEEEEEcccccccTHHTHHHHccc############## DISOP:02AL 84-122,132-147| PSIPRED ccEEEEcccccccccEEEEEEEEcccccEEccccEEEEEEccEEEEEEccccccEEEEEEEcccccEEEcccEEEEEEcccccccccHHHccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEccccccccEEHHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHcccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccHHHccccHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEcccEEEEEccccEEEEEcccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHcccHHHHHHHHHHHccc //