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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40048.1
DDBJ      :             2-dehydro-3-deoxyphosphooctonate aldolase
Swiss-Prot:KDSA_RHOPS   RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase;         EC=2.5.1.55;AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase;AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;AltName: Full=KDO-8-phosphate synthetase;         Short=KDO 8-P synthase;         Short=KDOPS;

Homologs  Archaea  26/68 : Bacteria  698/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:287 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->279 3fs2A PDBj 2e-91 72.1 %
:RPS:PDB   10->282 3e9aA PDBj 8e-52 41.6 %
:RPS:SCOP  10->281 1rzmA  c.1.10.4 * 2e-68 29.2 %
:HMM:SCOP  7->286 1o60A_ c.1.10.4 * 1.4e-105 54.3 %
:RPS:PFM   4->256 PF00793 * DAHP_synth_1 2e-29 38.7 %
:HMM:PFM   13->277 PF00793 * DAHP_synth_1 2.1e-82 36.0 258/272  
:BLT:SWISS 1->287 KDSA_RHOPS e-152 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40048.1 GT:GENE ABE40048.1 GT:PRODUCT 2-dehydro-3-deoxyphosphooctonate aldolase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3142166..3143029) GB:FROM 3142166 GB:TO 3143029 GB:DIRECTION - GB:PRODUCT 2-dehydro-3-deoxyphosphooctonate aldolase GB:PROTEIN_ID ABE40048.1 GB:DB_XREF GI:91683746 InterPro:IPR006218 InterPro:IPR006269 LENGTH 287 SQ:AASEQ MNKSIAPAPVVAAGDVKFGNSLPLSVIAGPCQLESRAHALEVASALKEIATRLGIGLVYKTSFDKANRTSAASARGIGLDAALAIFAEIRDSVGLPVLTDVHEAEQCARAAEAVDILQIPAFLCRQTDLLLAAAATGRIVNVKKGQFLAPWDMGNVVAKITTAGNQKVLVTERGASFGYNTLVSDMRALPIMARTTGAPVIFDATHSVQQPGGKGTSSGGEREFVPVLARAAVAVGVAGVFIETHPDPDHAPSDGPNMVPLRDFEALLRTLMEFDALAKKRPGAGTI GT:EXON 1|1-287:0| SW:ID KDSA_RHOPS SW:DE RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55;AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase;AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;AltName: Full=KDO-8-phosphate synthetase; Short=KDO 8-P synthase; Short=KDOPS; SW:GN Name=kdsA; OrderedLocusNames=RPD_2820; SW:KW Complete proteome; Cytoplasm; Lipopolysaccharide biosynthesis;Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->287|KDSA_RHOPS|e-152|100.0|287/287| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0009103|"GO:lipopolysaccharide biosynthetic process"|Lipopolysaccharide biosynthesis| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 227->240|vlaraavavgvagv| BL:PDB:NREP 1 BL:PDB:REP 11->279|3fs2A|2e-91|72.1|251/258| RP:PDB:NREP 1 RP:PDB:REP 10->282|3e9aA|8e-52|41.6|262/275| RP:PFM:NREP 1 RP:PFM:REP 4->256|PF00793|2e-29|38.7|243/278|DAHP_synth_1| HM:PFM:NREP 1 HM:PFM:REP 13->277|PF00793|2.1e-82|36.0|258/272|DAHP_synth_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00793|IPR006218| RP:SCP:NREP 1 RP:SCP:REP 10->281|1rzmA|2e-68|29.2|253/338|c.1.10.4| HM:SCP:REP 7->286|1o60A_|1.4e-105|54.3|280/0|c.1.10.4|1/1|Aldolase| OP:NHOMO 889 OP:NHOMOORG 741 OP:PATTERN 11-1--1111111111-111111-------------------------------11-111-11----- 333-----------------------------------------------------------1-------1--------1111111111111-111---111111111-11111111111222211111111112122211222422122221--11112-1111123332-1-----1----11122111211111112112111211111111111111111111111111111111111111111111111----------11----1--121------1111--------------1111111111111----------12112111111121232111111111-13--2222432521422221-22332111111111--1111111111111111111111-1111111111211111111111111111111111111111111111111111111------------1111111111111----1-11-111111211112111111121222222211111211111111111111111111112111111111--111123111111--1111123243333322323-34111111111111111111111111122111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111111111111111111121111111111111111211111111111111111111112111121111121211111111111111112121111111211111111111111111113112211----------1---------------------------1--1-111111 ------------------------------------------------------------------------------------------------------------1------------------------------------------------------1---------11-----1--112113-41--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 96.5 SQ:SECSTR #########cEEETTEEEcTTcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHTccEEEEEEcccTTcccccccccccHHHHHHHHHHHHHHHccEEEEEcccGGGHHHHHTTccEEEEcGGGTTcHHHHHHHHHTTcEEEEEccTTccGGGHHHHHHHHHHTTcccEEEEEccEEcccccEEccTHHHHHHHHHTcccEEEEHHHGGEETTTTcccHTccGGGHHHHHHHHHHTcccEEEEEEEccGGGccccGGGcEEGGGHHHHHHHHHHHHHHHHHcccccc# DISOP:02AL 1-4,215-215,286-288| PSIPRED cccccccccEEEEccEEEcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHHccEEEEcccccccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccc //