[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40084.1
DDBJ      :             translation elongation factor Ts (EF-Ts)
Swiss-Prot:EFTS_RHOPS   RecName: Full=Elongation factor Ts;         Short=EF-Ts;

Homologs  Archaea  0/68 : Bacteria  903/915 : Eukaryota  89/199 : Viruses  0/175   --->[See Alignment]
a.5.2d.43.1
:308 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->307 1efuB PDBj 1e-47 47.0 %
:RPS:PDB   2->303 1efuB PDBj 1e-41 36.5 %
:RPS:SCOP  2->40 1xb2B1  a.5.2.2 * 7e-13 28.2 %
:RPS:SCOP  56->146 1xb2B2  d.43.1.1 * 7e-23 40.7 %
:RPS:SCOP  144->287 1aipC2  d.43.1.1 * 9e-31 34.8 %
:HMM:SCOP  4->55 1aipC1 a.5.2.2 * 1e-18 65.4 %
:HMM:SCOP  57->288 1tfeA_ d.43.1.1 * 4.1e-47 45.0 %
:RPS:PFM   57->287 PF00889 * EF_TS 3e-37 50.0 %
:HMM:PFM   57->288 PF00889 * EF_TS 4.9e-73 50.9 220/221  
:HMM:PFM   4->41 PF00627 * UBA 1.6e-14 35.1 37/37  
:BLT:SWISS 1->308 EFTS_RHOPS e-161 100.0 %
:PROS 12->27|PS01126|EF_TS_1
:PROS 75->85|PS01127|EF_TS_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40084.1 GT:GENE ABE40084.1 GT:PRODUCT translation elongation factor Ts (EF-Ts) GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3182430..3183356) GB:FROM 3182430 GB:TO 3183356 GB:DIRECTION - GB:PRODUCT translation elongation factor Ts (EF-Ts) GB:PROTEIN_ID ABE40084.1 GB:DB_XREF GI:91683782 InterPro:IPR000449 InterPro:IPR001816 LENGTH 308 SQ:AASEQ MATITAAMVKELRETTGVGMMDCKQALAENDGNMEAAVDWLRKKGLSKAAKKAGRVAAEGLIGALTDGTKGVVIEVNSETDFVARNEQFQGLVKMIAQVALKVGADVDKINAAPVGSSTVAGAISDAIATIGENMTLRRAAALEVTQGVVASYIHNAVIDGAGKMGVIVALESTGKADELGVLGRQLAMHIAATNPQALDPAGLDPEVVRREREVMADKYRQQGKPENMIEKIVENGLKTYYKEVCLLEQAYIHDEKGKAVGQAVKDAEGKVGAPIKITGFFRYALGEGIEKQTSDFAAEVAAASGQK GT:EXON 1|1-308:0| SW:ID EFTS_RHOPS SW:DE RecName: Full=Elongation factor Ts; Short=EF-Ts; SW:GN Name=tsf; OrderedLocusNames=RPD_2856; SW:KW Complete proteome; Cytoplasm; Elongation factor; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->308|EFTS_RHOPS|e-161|100.0|308/308| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003746|"GO:translation elongation factor activity"|Elongation factor| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 12->27|PS01126|EF_TS_1|PDOC00867| PROS 75->85|PS01127|EF_TS_2|PDOC00867| SEG 41->55|lrkkglskaakkagr| BL:PDB:NREP 1 BL:PDB:REP 2->307|1efuB|1e-47|47.0|281/282| RP:PDB:NREP 1 RP:PDB:REP 2->303|1efuB|1e-41|36.5|277/282| RP:PFM:NREP 1 RP:PFM:REP 57->287|PF00889|3e-37|50.0|214/215|EF_TS| HM:PFM:NREP 2 HM:PFM:REP 57->288|PF00889|4.9e-73|50.9|220/221|EF_TS| HM:PFM:REP 4->41|PF00627|1.6e-14|35.1|37/37|UBA| GO:PFM:NREP 3 GO:PFM GO:0003746|"GO:translation elongation factor activity"|PF00889|IPR014039| GO:PFM GO:0005622|"GO:intracellular"|PF00889|IPR014039| GO:PFM GO:0006414|"GO:translational elongation"|PF00889|IPR014039| RP:SCP:NREP 3 RP:SCP:REP 2->40|1xb2B1|7e-13|28.2|39/56|a.5.2.2| RP:SCP:REP 56->146|1xb2B2|7e-23|40.7|91/111|d.43.1.1| RP:SCP:REP 144->287|1aipC2|9e-31|34.8|138/143|d.43.1.1| HM:SCP:REP 4->55|1aipC1|1e-18|65.4|52/52|a.5.2.2|1/1|UBA-like| HM:SCP:REP 57->288|1tfeA_|4.1e-47|45.0|140/142|d.43.1.1|1/1|Elongation factor Ts (EF-Ts), dimerisation domain| OP:NHOMO 1065 OP:NHOMOORG 992 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111---111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111-11-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11111111111111111111111111111111 11--111-31--111--------------------------------------------------------------------------1-1-111-------1-1--41212111-111-1112-1215B1-211-1-11-11--111-1--1---12111111111111-1-11121S222225232-241211-12 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 307 STR:RPRED 99.7 SQ:SECSTR HccccHHHHHHHHHHHcccHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEETTEEEEEEEEEccHHHHTcHHHHHHHHHHHHHHHHHccccccHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEETTTEEEEEEEEcccHHcHHHHHHHHHHHHHHccccccGGGccHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHcTTTcEETTEEEEEEHHHHHHTTTcEEccccEEEEEEEEETTTTcccccccHHHHHHHHccc# DISOP:02AL 1-1,214-227,307-309| PSIPRED cccccHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHcHHHHcEEEEEEEcccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccHHHHHHcccccccHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEEEEEEEEEccccccccccHHHHHHHHHccc //