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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40107.1
DDBJ      :             NADH-quinone oxidoreductase, chain G
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  657/915 : Eukaryota  167/199 : Viruses  0/175   --->[See Alignment]
c.81.1d.15.4d.58.1
:691 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->576 2fug3 PDBj 2e-57 33.5 %
:BLT:PDB   553->590 2v45A PDBj 9e-04 39.5 %
:RPS:PDB   2->207 2bs2B PDBj 6e-19 10.3 %
:RPS:PDB   225->669 1aa6A PDBj 2e-39 19.5 %
:RPS:SCOP  1->133 1c4aA2  d.15.4.2 * 2e-27 20.0 %
:RPS:SCOP  135->212 1c4aA3  d.58.1.5 * 2e-13 19.2 %
:RPS:SCOP  221->627 2fug32  c.81.1.1 * 1e-61 29.1 %
:HMM:SCOP  1->134 1fehA2 d.15.4.2 * 2.2e-32 43.2 %
:HMM:SCOP  83->220 2fug34 d.58.1.5 * 4.5e-42 44.5 %
:HMM:SCOP  221->640 2fug32 c.81.1.1 * 4e-105 33.8 %
:RPS:PFM   8->52 PF00111 * Fer2 8e-04 48.7 %
:RPS:PFM   91->131 PF10588 * NADH-G_4Fe-4S_3 4e-16 70.7 %
:RPS:PFM   553->599 PF00384 * Molybdopterin 1e-10 48.9 %
:RPS:PFM   630->678 PF09326 * DUF1982 8e-11 53.1 %
:HMM:PFM   279->602 PF00384 * Molybdopterin 2.9e-71 35.3 323/432  
:HMM:PFM   91->131 PF10588 * NADH-G_4Fe-4S_3 4.6e-22 58.5 41/41  
:HMM:PFM   630->678 PF09326 * DUF1982 3e-21 53.1 49/49  
:HMM:PFM   5->55 PF00111 * Fer2 1.7e-12 53.3 45/77  
:BLT:SWISS 3->679 NQO3_PARDE 0.0 58.1 %
:PROS 31->48|PS00641|COMPLEX1_75K_1
:PROS 106->118|PS00642|COMPLEX1_75K_2
:PROS 153->163|PS00643|COMPLEX1_75K_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40107.1 GT:GENE ABE40107.1 GT:PRODUCT NADH-quinone oxidoreductase, chain G GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3207429..3209504) GB:FROM 3207429 GB:TO 3209504 GB:DIRECTION - GB:PRODUCT NADH-quinone oxidoreductase, chain G GB:PROTEIN_ID ABE40107.1 GB:DB_XREF GI:91683805 InterPro:IPR000283 InterPro:IPR001041 InterPro:IPR006656 InterPro:IPR010228 LENGTH 691 SQ:AASEQ MIKIIVDGKEVEVPPEYTLLQACEQAGAEIPRFCYHERLSIAGNCRMCLVELKGTPKPVASCAWGVRDCRPGPNGELPEINTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGVDSSRFAENKRAVEDKYLGVLVKTSMNRCIQCTRCVRFAAEVCGVPEMGATGRGEDMEITTYLESALTSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSIDVMDGLGSAIRVDTRGREVMRILPRINEAINEEWISDKTRHVIDGLRTQRLDQPYVREGGKLRPASWPEAFGAIKAKLAGVGGKKIGAIAGDLAAVEEMFALKQLLEKLGSSNLAAPSVAAFDPKAGRASYIFNPTIAGIEQADALLIIGSNPRKEAAILNARIRKRWRSGGMPIGVIGEQADLTYPTDYLGAGAETLADIASGKHPFAETLKKAKHPIVLIGAAAISRRDGAALLSAAAKLAVDVGALADGWNGFAVLHPAASSVGALDIGFAPGAGGMDATQMTTQGAIDVLFSLGSDEVKLPDGAFVVYIGTHGDRGAHRADVILPGAAYTEKSGIYVNTEGRVQIANRASFPPGEAREDWSIIRALSEALGHKLPYDSLAALRKAIFAAVPHLMRVDQIEAGDAGAVRTLAAAGGSVDKAPFKPAISDFYMTNPIARASAVMAECSRLASGQLLTAAE GT:EXON 1|1-691:0| BL:SWS:NREP 1 BL:SWS:REP 3->679|NQO3_PARDE|0.0|58.1|651/673| PROS 31->48|PS00641|COMPLEX1_75K_1|PDOC00554| PROS 106->118|PS00642|COMPLEX1_75K_2|PDOC00554| PROS 153->163|PS00643|COMPLEX1_75K_3|PDOC00554| SEG 301->324|gaikaklagvggkkigaiagdlaa| SEG 462->472|aallsaaakla| BL:PDB:NREP 2 BL:PDB:REP 1->576|2fug3|2e-57|33.5|558/737| BL:PDB:REP 553->590|2v45A|9e-04|39.5|38/723| RP:PDB:NREP 2 RP:PDB:REP 2->207|2bs2B|6e-19|10.3|195/239| RP:PDB:REP 225->669|1aa6A|2e-39|19.5|442/696| RP:PFM:NREP 4 RP:PFM:REP 8->52|PF00111|8e-04|48.7|39/71|Fer2| RP:PFM:REP 91->131|PF10588|4e-16|70.7|41/41|NADH-G_4Fe-4S_3| RP:PFM:REP 553->599|PF00384|1e-10|48.9|47/423|Molybdopterin| RP:PFM:REP 630->678|PF09326|8e-11|53.1|49/49|DUF1982| HM:PFM:NREP 4 HM:PFM:REP 279->602|PF00384|2.9e-71|35.3|323/432|Molybdopterin| HM:PFM:REP 91->131|PF10588|4.6e-22|58.5|41/41|NADH-G_4Fe-4S_3| HM:PFM:REP 630->678|PF09326|3e-21|53.1|49/49|DUF1982| HM:PFM:REP 5->55|PF00111|1.7e-12|53.3|45/77|Fer2| GO:PFM:NREP 6 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00111|IPR001041| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF00111|IPR001041| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF09326|IPR015405| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF09326|IPR015405| GO:PFM GO:0055114|"GO:oxidation reduction"|PF09326|IPR015405| RP:SCP:NREP 3 RP:SCP:REP 1->133|1c4aA2|2e-27|20.0|125/126|d.15.4.2| RP:SCP:REP 135->212|1c4aA3|2e-13|19.2|78/83|d.58.1.5| RP:SCP:REP 221->627|2fug32|1e-61|29.1|385/437|c.81.1.1| HM:SCP:REP 1->134|1fehA2|2.2e-32|43.2|125/0|d.15.4.2|1/1|2Fe-2S ferredoxin-like| HM:SCP:REP 83->220|2fug34|4.5e-42|44.5|137/0|d.58.1.5|1/1|4Fe-4S ferredoxins| HM:SCP:REP 221->640|2fug32|4e-105|33.8|399/0|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| OP:NHOMO 1286 OP:NHOMOORG 859 OP:PATTERN ------11111111111-------1---21----12111121112-321--1-1----1-1111---- 11221---------11111-11--12111111211111111111-1--1-----1-----11111122211--------112-11112--1--1-----1-11--21111--------------11----2---1122222323111111111--11------11--11--------------111112212-22222222212222221-22-2221-11----111111--1111111111111111--111---------------------------------------------------------------------1551211111112133111-1112-21231-35325557331311121--31-111111111233231134333411111111111-33233433221122223332223322112222333322311111111322-23111111111111111111111111111111121221-2221222222222222222222222222333431233133111212332332122213111111111333215512-1-13111--454354355111111581111111111111111111122-2211112---2---1-1111-12111-1211--21--221111111112111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111111114-121---1-1---------11111111111-1111221122222-11111111111111111-----21-11111212211111111111111111--------1---------------------------2132222222221 ------1-211-1111111111111111111111111111111111-111111111111111111----1--111------11111---11111111111111122-11121322121111111111119D1-12111113111111111111111211133111222111131-2121J111313134121-11---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 691 STR:RPRED 100.0 SQ:SECSTR EcccEEEEEEEEccTTccHHHHHHHHHHHTcTTcccccccccccccTTEEEEcTTTEEEEGGGccGGGcHcccHHTTcEEEEEccTTcEEccGEETTEEEcHHHHHHHHHHTTccccccccccTTcccccccHHHHHHHHHHHcHHHHTcHHHHHcTTccHHHHHHHHHTcTTccccHHHHHHHHccTTTGGGcccccHHHHHcTTcHHHHHHHHHHHHHccTTEEEEEccccTTccEEEEEEccccEEEEEEccccTTTTTcccHHHHHTTGGGccccccccEEccccccEEccHHHHHHHHHHHHHHHHHHHcGGGEEEEccHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHccccccccGGGGGGccEEEEEcccHHHHcHHHHHHHHHHHHTTcEEEEEGGGGccEEEcccTTcHHHHHHHHHHHHHHTHHHHHHHcccEEEEEcHHHHccTTHHHHHHHHHHHHHHTTccccTTccEEEccccTTHHHHHHTTccTTEccccGGGHHHTTcccEEEEEcccHHHHHHccEEEEEEccccHHHHTccEEEEcccGGGccEEEEcTTcEEEEEccccccccccccHHHHHHHHHHHTTcccccccHHHHHHHHHHHcTTTTTccHHHHTTTccEEcccccccTTccccccccccccccTTccEGccEEEEcccGGGccccccccT DISOP:02AL 689-692| PSIPRED cEEEEEccEEEEEccccHHHHHHHHcccccccccccccccccccccEEEEEEcccccccccccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccEEEEccccccccHHHHHHHHHHccccEEEEEccccccEEEEccccccccccccHHHHHcccHHHccccccccccHHHHHHcccccccccccccEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHcccccccEEEEcccEEEEcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEcHHHHHHHHHHHcccccccccHHHHHHccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHcccHHHHHHHHccccHHHHHHHHccccEEEEEHHHHccccHHHHHHHHHHHHHHHcccccccccEEEccccHHHccHHHHcccccccHHHHHHHHHcccccEEEEEcccHHHcccccEEEEEEcccccHHHHccEEEcccccHHcccEEEcccccEEEcHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHccccHHHHHHHHccccHHccc //