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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40133.1
DDBJ      :             Amidase
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  696/915 : Eukaryota  147/199 : Viruses  0/175   --->[See Alignment]
c.117.1
:474 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->462 3h0lA PDBj 2e-33 33.1 %
:RPS:PDB   5->472 2dqnA PDBj 1e-76 23.1 %
:RPS:SCOP  5->472 2df4A1  c.117.1.1 * 3e-77 22.3 %
:HMM:SCOP  1->472 2f2aA1 c.117.1.1 * 1.6e-112 38.1 %
:RPS:PFM   28->453 PF01425 * Amidase 7e-35 35.4 %
:HMM:PFM   27->453 PF01425 * Amidase 8.5e-92 35.7 423/435  
:BLT:SWISS 10->472 NYLA_FLASK 3e-60 37.6 %
:PROS 148->179|PS00571|AMIDASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40133.1 GT:GENE ABE40133.1 GT:PRODUCT Amidase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3237004..3238428) GB:FROM 3237004 GB:TO 3238428 GB:DIRECTION - GB:PRODUCT Amidase GB:PROTEIN_ID ABE40133.1 GB:DB_XREF GI:91683831 InterPro:IPR000120 LENGTH 474 SQ:AASEQ MAIKDYSEHDGVGLAELVRNKQVSARELLDEAIARTDALDGKLNAVVVRHDDYARQQIEAGLPDGPFTGVPFLLKDLDLLAGTKTTFGASVYKDFVAPHTGTLAQRFLAAGVTIYGKSASPEFGLMPTTESRLHGPTRNPWNLDHSSGGSSGGAAAAVAARILPVAHASDGGGSIRIPASACGVFGLKPTRARNPIGPDRGEGWGGFACGHVVSISVRDSAVMLDALHGPEPSSPYVAPPPERPFAQEVGRDPGKLRIAFTDVSTYGDPIDPEIAAAVRDTARLLEGLGHHVEQHAPKLPADPAAVIATIVACNTGLTVKLAEQALGRAITDRDFEVLTLASAANAGRSSGLDYCAAQLAAFQISRSLADFFATCDVFLSPTLCTLPLKIGELDTMARDLSGISPLLQRYIPGTSLFNMSGQPAMSVPLAWSGSGLPIGMMFAGRFGDEATLLRLASQLEQERPWKNRRPPLCA GT:EXON 1|1-474:0| BL:SWS:NREP 1 BL:SWS:REP 10->472|NYLA_FLASK|3e-60|37.6|460/493| PROS 148->179|PS00571|AMIDASES|PDOC00494| SEG 146->160|ssggssggaaaavaa| SEG 230->244|pepsspyvappperp| BL:PDB:NREP 1 BL:PDB:REP 22->462|3h0lA|2e-33|33.1|426/478| RP:PDB:NREP 1 RP:PDB:REP 5->472|2dqnA|1e-76|23.1|458/485| RP:PFM:NREP 1 RP:PFM:REP 28->453|PF01425|7e-35|35.4|398/425|Amidase| HM:PFM:NREP 1 HM:PFM:REP 27->453|PF01425|8.5e-92|35.7|423/435|Amidase| GO:PFM:NREP 1 GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF01425|IPR000120| RP:SCP:NREP 1 RP:SCP:REP 5->472|2df4A1|3e-77|22.3|458/485|c.117.1.1| HM:SCP:REP 1->472|2f2aA1|1.6e-112|38.1|459/0|c.117.1.1|1/1|Amidase signature (AS) enzymes| OP:NHOMO 2035 OP:NHOMOORG 888 OP:PATTERN 11-1--2322222222--1-111221111123111---11--111111111111------------11 3592422322332364566-64228E66666645556DC924241231122142322111355226743321111111-111511111--------1--------2113111111111-111111-1--1111-11433331111523212232211111211121134531111111111113231111131111111111111111121222111122123111111112211111111111111111111312122121111122221111132223332222122111111111112322322232232122111222211-2111111111111-111---112-111111221111111111111114115225-----11GHI112A47B222332331213-2272-4284661722433233442G4-51-43323322311111111433211121111----11111111111111111----1226116AB8876867935555558855563786747C512221235336252864211111111111111111132242411121111111111111121443446111111111111-1111111111111122----31--21--------1------1---1--11121--------22--1------------------------------12111-1-----------------2-------------------------11111333314424---------------111111212211534417242234215461111111111-----------------121--------11111111221111111111-------------1------1-----1111112111221 -1--11--------22352466768672222226665535335233412733A612112333212-1-11--2-1------11122---522343332231-212--133A221111----1---2--1121-1-3---11--21-11112--11222123--21213234-1311211A1212483453331-2222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 468 STR:RPRED 98.7 SQ:SECSTR ####TTTTccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHTcccccccccEEEEETTcccTTccccTTcGGGTTcccccccHHHHHHHHTTcEEEEEEcccGGGcccccTTccccccccTTcTTcccccccHHHHHHHHTTcccEEEEEccccTTHHHHHHHTcEEEEccTTccccTTcccTccTTTccEEEEEccHHHHHHHHHHHccccTTcTTccccccccccTTTTcccTTcEEEEEGGGGGcTTccHHHHHHHHHHHHHHHHTTcEEEEEccGGGGGHHHHHHHHHHHHHHTTTcccccccccccccccHHHHHHHHHHHHHHcTTTHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccTTTcTTcHHHHHTEEEEHHHTTTTTHHHHHHTccEEEEEEEEEHTTEEEEEEEEccTTcHHHHHHHHHHHHHHcccTTTGGGc## DISOP:02AL 1-1,151-151,474-475| PSIPRED ccccHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHcccccccccccccHHHEHHHccccccccccHHHccccccccHHHHHHHHHcccEEEEEEccHHHHcccccccccccccccccccccccccccccHHHHHHHcccEEEEEEcccccccccHHHcccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHcccEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHcccccccccccc //