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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40137.1
DDBJ      :             binding-protein-dependent transport systems inner membrane component
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  564/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   107->313 2r6gF PDBj 7e-26 31.1 %
:RPS:PDB   237->274 3dhwA PDBj 3e-07 28.9 %
:RPS:SCOP  108->335 2r6gF2  f.58.1.1 * 5e-26 29.4 %
:RPS:PFM   157->330 PF00528 * BPD_transp_1 4e-09 31.9 %
:HMM:PFM   140->336 PF00528 * BPD_transp_1 1.3e-19 22.2 167/185  
:HMM:PFM   59->96 PF01277 * Oleosin 0.0003 37.8 37/118  
:BLT:SWISS 88->339 Y4OQ_RHISN 3e-35 32.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40137.1 GT:GENE ABE40137.1 GT:PRODUCT binding-protein-dependent transport systems inner membrane component GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(3241522..3242568) GB:FROM 3241522 GB:TO 3242568 GB:DIRECTION - GB:PRODUCT binding-protein-dependent transport systems inner membrane component GB:PROTEIN_ID ABE40137.1 GB:DB_XREF GI:91683835 InterPro:IPR000515 LENGTH 348 SQ:AASEQ MISAAAPTGAMRHRPEPRIASAPGSFPAISCEDDAIMVDIPYQPGRVAAASTRRKRSGLAAMMHRKSTIAFLMALPLLVLIGVLVVYPALYAIHLSTLNKTMQRFVGFGNFQFLFKRDTFWLVVQQSCLFAITAVFFKALLGFIVAHFVHNVPAKGQRKWRGMLLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLGLFGAGPIPWTGDAAWARFSVILVNIWYGAPFFMIMYLAALKSVPEQLYEAASIDGANWWQRLWYVTLPMMRNIIAITTLFSLIVTFANFDIVRILTAGGPLDHTHIFATWAFRIGIEGSDIPLGASVSLFMLPILAVAAIFILRDINKRGNES GT:EXON 1|1-348:0| BL:SWS:NREP 1 BL:SWS:REP 88->339|Y4OQ_RHISN|3e-35|32.8|250/309| TM:NTM 6 TM:REGION 72->94| TM:REGION 128->150| TM:REGION 171->193| TM:REGION 214->236| TM:REGION 259->281| TM:REGION 319->341| SEG 72->86|lmalpllvligvlvv| BL:PDB:NREP 1 BL:PDB:REP 107->313|2r6gF|7e-26|31.1|206/490| RP:PDB:NREP 1 RP:PDB:REP 237->274|3dhwA|3e-07|28.9|38/203| RP:PFM:NREP 1 RP:PFM:REP 157->330|PF00528|4e-09|31.9|160/195|BPD_transp_1| HM:PFM:NREP 2 HM:PFM:REP 140->336|PF00528|1.3e-19|22.2|167/185|BPD_transp_1| HM:PFM:REP 59->96|PF01277|0.0003|37.8|37/118|Oleosin| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 108->335|2r6gF2|5e-26|29.4|228/244|f.58.1.1| OP:NHOMO 3265 OP:NHOMOORG 605 OP:PATTERN 111-411145344452711321--71162-4-----------------------2344111431---- --11l213334-1123344-423349444444255514575436N*Z2CHG4PKN12B--758AJ4EOYI57444DB81---4-------------------------1---------------------------7AA77---76222311-11222222222221333--2-----2----DC255DG-953323232342243224SI994833454B2945778777A*111111111111111-1---441-23--22233--22---1-4234232444442266667776666433334444333335411-5553E4-2A2222222524C2--1445a126223E1-23---1J--1886G211-------111112-FBB1--535536766678777E---6--4-19Q--YVVJdZRokgYS11---9E98769G86--------4112--12-----------------------------2---2-1433368877652444448A5554336572223--2238-23342668D----1--3--------------1-3--11---11111---------222224----------1------------------125-----1-6----------------------1---------26771413333333333-33333334333323333325655511123222222222222226-213333--488888888888---------11111-86D111111-----1--1------------22322233422233534-----------222111113153311111111111111-------------------12---1-----121--------31---6KFB7AQ9DA-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------1--2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 66.4 SQ:SECSTR ##########################################################################################################TTTTTcGGGTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTHHHHHHHTTHHHHccHHHHHHHHHHHTcccccHHHHHHHTccccccTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHGGHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTcHHHHHHHcccccccccccHHHHHHHHHTcc#HcTTTTTHHHHHHHHHHHHHHHHH########## DISOP:02AL 1-13,15-19,46-66,346-349| PSIPRED cccccccccHHcccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //