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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE40214.1
DDBJ      :             LSU ribosomal protein L9P
Swiss-Prot:RL9_RHOPS    RecName: Full=50S ribosomal protein L9;

Homologs  Archaea  0/68 : Bacteria  660/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
d.100.1d.99.1
:194 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->144 1vs6H PDBj 9e-20 43.8 %
:RPS:PDB   2->144 3bboJ PDBj 2e-36 28.9 %
:RPS:SCOP  1->55 1divA2  d.100.1.1 * 7e-18 41.8 %
:RPS:SCOP  77->147 1divA1  d.99.1.1 * 2e-17 33.8 %
:HMM:SCOP  1->55 2j01I2 d.100.1.1 * 9.7e-17 54.5 %
:HMM:SCOP  56->147 1divA1 d.99.1.1 * 1.8e-23 39.1 %
:RPS:PFM   1->43 PF01281 * Ribosomal_L9_N 8e-11 62.8 %
:RPS:PFM   72->147 PF03948 * Ribosomal_L9_C 2e-11 40.8 %
:HMM:PFM   62->146 PF03948 * Ribosomal_L9_C 1e-26 38.8 85/87  
:HMM:PFM   1->48 PF01281 * Ribosomal_L9_N 1.6e-24 56.2 48/48  
:BLT:SWISS 1->181 RL9_RHOPS 2e-83 100.0 %
:PROS 13->40|PS00651|RIBOSOMAL_L9
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE40214.1 GT:GENE ABE40214.1 GT:PRODUCT LSU ribosomal protein L9P GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 3328125..3328709 GB:FROM 3328125 GB:TO 3328709 GB:DIRECTION + GB:PRODUCT LSU ribosomal protein L9P GB:PROTEIN_ID ABE40214.1 GB:DB_XREF GI:91683912 InterPro:IPR000244 LENGTH 194 SQ:AASEQ MEVILLERVAKLGQMGELVRVKDGFARNFLLPRGKALRATAANRDKYEHMKADLEARNIEAKAEAAKVAEKIDGKNVIVIRQASETGQLFGSVSVRDIVTSFEADGVKITRSQILLDAPIKTIGRHTIEVAVHPEVEVGVSVTVARSVEEAERINRGEDISSRREDQDAAAEAIAAAGEFFDPDAQQDEEPEQQ GT:EXON 1|1-194:0| SW:ID RL9_RHOPS SW:DE RecName: Full=50S ribosomal protein L9; SW:GN Name=rplI; OrderedLocusNames=RPD_2988; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->181|RL9_RHOPS|2e-83|100.0|181/194| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 13->40|PS00651|RIBOSOMAL_L9|PDOC00560| COIL:NAA 24 COIL:NSEG 1 COIL:REGION 46->69| SEG 60->71|eakaeaakvaek| SEG 169->177|aaaeaiaaa| SEG 182->193|dpdaqqdeepeq| BL:PDB:NREP 1 BL:PDB:REP 1->144|1vs6H|9e-20|43.8|144/149| RP:PDB:NREP 1 RP:PDB:REP 2->144|3bboJ|2e-36|28.9|142/148| RP:PFM:NREP 2 RP:PFM:REP 1->43|PF01281|8e-11|62.8|43/48|Ribosomal_L9_N| RP:PFM:REP 72->147|PF03948|2e-11|40.8|76/87|Ribosomal_L9_C| HM:PFM:NREP 2 HM:PFM:REP 62->146|PF03948|1e-26|38.8|85/87|Ribosomal_L9_C| HM:PFM:REP 1->48|PF01281|1.6e-24|56.2|48/48|Ribosomal_L9_N| RP:SCP:NREP 2 RP:SCP:REP 1->55|1divA2|7e-18|41.8|55/55|d.100.1.1| RP:SCP:REP 77->147|1divA1|2e-17|33.8|71/94|d.99.1.1| HM:SCP:REP 1->55|2j01I2|9.7e-17|54.5|55/0|d.100.1.1|1/1|L9 N-domain-like| HM:SCP:REP 56->147|1divA1|1.8e-23|39.1|92/94|d.99.1.1|1/1|Ribosomal protein L9 C-domain| OP:NHOMO 675 OP:NHOMOORG 667 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--1------11--1111111-------1111111111111--11---111--111111--1111111-1------1-1---1-11-1111121-111---------------1---1---11111111-1111-1----------------------11----11111111--1-1--1-----------------------------------------------111111111111111111111111-111111111111111111--11--1111111111111111111111111111111111111-11111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111---1-------1-------11-1-1111-1111111--1111-11111111111111-11111111111--1-1111111111111-1111111111111111111-1---11-1111111111111111111111111-1-----------111111111111111111-11111111111111------1111111111---------1---1--------111111111111111111111111111111111111111---1111111-----------------------111-11---1-1--11 -----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------413-------111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 147 STR:RPRED 75.8 SQ:SECSTR ccccccccccccccccccccccccccccccTTTTccccccHHHHHHHHTTTHHHHGGGTTTTHHHHTHHHHcccccccccccccTTcccccccccHHHHGGTcccccccccTTccccccccccccEEEcccccTTccccEEEccEEc############################################### DISOP:02AL 61-64,152-171,183-195| PSIPRED cEEEEccccccccccccEEEEccccEEccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEccccEEEEcccHHHHHHHHHHccccccccEEEEcccccccEEEEEEEEEcccEEEEEEEEEEEcHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccccccc //