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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67716.1
DDBJ      :             putative IS4 family transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.163.1
:690 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   384->572 1crxA PDBj 5e-14 10.5 %
:RPS:SCOP  380->572 1crxA2  d.163.1.1 * 3e-13 8.6 %
:HMM:SCOP  350->569 1a0pA2 d.163.1.1 * 1e-21 28.6 %
:RPS:PFM   381->560 PF00589 * Phage_integrase 1e-06 34.4 %
:HMM:PFM   382->560 PF00589 * Phage_integrase 1.6e-15 25.8 151/173  
:BLT:SWISS 381->685 TNPB_STAAU 8e-08 24.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67716.1 GT:GENE BAC67716.1 GT:PRODUCT putative IS4 family transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 7554..9626 GB:FROM 7554 GB:TO 9626 GB:DIRECTION + GB:PRODUCT putative IS4 family transposase GB:NOTE PF00589: Phage integrase family GB:PROTEIN_ID BAC67716.1 LENGTH 690 SQ:AASEQ MGLAAGSASAVGVLLSDHPSEAGACCRQVCFQGAHASRWLSSVACWRLSSSRWLFRVSSSTRSVRCPVSRASSCCPSWRFREHRRTPPDAAVAPWAAQQPPYLAPHQFSLLPLPELLRWEVLYGLQQVDPWLRIFEPAQVRRMVRDLAETGTLIDGIRDQQMCPRSTVAVLRMLGRVRTAVRAGHAEYTGTAPAQDDVLDLRALGQRSRTPAGIRQPKTVDLRTIRQPWLRGLLRTWTVQQRPGADEFARTLRGVELASRALAQRPGTDDPAGLRYDDVTAVVDAIRTALKRDGEPAGWNYRMSIASHFFALIDYGHRSGAADDLSAAFVRDPALHRIPEQEANEDEIGKAIPEPVIRQLDAHLHLLGLGRARGQRTLAPDDLQLMYRTLYILLRDTGQRPLEVLSLPRDCLETRNDQISLIWNNHKARRHRRRLPITTSTAQAIRTWQERREQLQASLPPTGADYLFPALTHLATRPYLHTSYLGETLRDWVDSIPHLHGEGTDTQGNPLPFDRSLIYAYAFRHSYAQRHADAGTPLDVLRELMDHKSVSTTQRYYTVSLKRKRDAVTKLAAHVVDHHGHPSPSSETAYELRSVAVPYGGCTEPSNVKAAGSSCPIRFQCAGCGFYRPDPSYLPAIEQHINELRADRETAQAMDAAEFVITAFTAQITAYEQVTDRMQRRLAALPVAER GT:EXON 1|1-690:0| BL:SWS:NREP 1 BL:SWS:REP 381->685|TNPB_STAAU|8e-08|24.2|273/630| SEG 2->16|glaagsasavgvlls| SEG 46->60|wrlsssrwlfrvsss| SEG 87->101|ppdaavapwaaqqpp| SEG 358->379|rqldahlhllglgrargqrtla| RP:PDB:NREP 1 RP:PDB:REP 384->572|1crxA|5e-14|10.5|181/322| RP:PFM:NREP 1 RP:PFM:REP 381->560|PF00589|1e-06|34.4|151/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 382->560|PF00589|1.6e-15|25.8|151/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 380->572|1crxA2|3e-13|8.6|185/212|d.163.1.1| HM:SCP:REP 350->569|1a0pA2|1e-21|28.6|182/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 7 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- --------------------------------11-2--1----------------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 48.0 SQ:SECSTR #####################################################################################################################################################################################################################################cHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHTTTTTccGGGccHHHHHHHHHHHHcHHTTcccHHHHHHHHHHHHHHHH##HTcccccccccccccccTTcccccccccHHHHHHHHHHccTTHHHHHHHHTTcc############GTccHHHHHHHHHHHHHHcccHHHHHHccGGGEEEcGGGcEEEEEccccccccEEEEccHHHHHHHHHHHHTTcGGGcTTcccccEEcTTccEEccccccccHHHHHHHHHHHHHHHHcccccTTEEEccccccccccccTTHHHHHHHHHHHHTTccHHHHHHHHTccccTTHHHHcTTcGGGccHHHHHHTcc#################################################################################################################### DISOP:02AL 1-7, 686-690| PSIPRED ccccccccHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccEEEEEccccccEEccHHHHHHccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHcHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccccccccHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHcccHHHHHHcccEEEEEEEEcccccccEEEEccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccHHHHHHccccEEEcccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccc //