[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67746.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
b.69.2b.69.3
:440 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   179->381 1l0qA PDBj 1e-06 32.4 %
:RPS:SCOP  152->424 1jmxB  b.69.2.2 * 2e-05 13.5 %
:HMM:SCOP  121->424 1fwxA2 b.69.3.1 * 1.2e-18 30.2 %
:RPS:PFM   174->423 PF10282 * Muc_lac_enz 4e-08 32.1 %
:HMM:PFM   98->201 PF10282 * Muc_lac_enz 3.4e-05 25.0 96/345  
:HMM:PFM   242->331 PF10282 * Muc_lac_enz 4.2e-08 27.0 89/345  
:HMM:PFM   341->423 PF10282 * Muc_lac_enz 6e-05 27.7 83/345  
:BLT:SWISS 241->369 TOLB_BORA1 3e-06 29.3 %
:REPEAT 2|341->389|392->438
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67746.1 GT:GENE BAC67746.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(45819..47141) GB:FROM 45819 GB:TO 47141 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAC67746.1 LENGTH 440 SQ:AASEQ MCRGPLGSYESLTRPSFAFIVISPSATLLTHAPGSQEPHVSRHNRRRSTLHKRATVFGGGTVAVAAVVATVNIASADQVSPTPRTASKADHAVFVQGNELAGNTIHVFRRGDDGKLTAAGKYATGGKGGDQVDAPTDSLASQGSLVYDRRSGRLLALNAGSGTLTSYAVHGQKLTDRQTVPTGGDFPVGIAVSGDLAYVMNAGGAGSVQGFRITTMGLKPLSGSLRTLGLKNEKVPLFSSSPGQAAFTPDGRNLVVTTKSANTVEVFPIGRDGRPAHKPVVNKSAGMVPFAIAFDKTGRMLVAEAAESTVSTYKVRRNGELQVLQKPLPNGQDTLCWLERAGDFFYGGNTGNSTVSGYRMDARGRLALTNEAGIAAAPSAKSQGVIDIAVAADKFVYVQNATSGTVDGFRVGRTGALTKVTTVTDLPAFAESGMEGIAAV GT:EXON 1|1-440:0| BL:SWS:NREP 1 BL:SWS:REP 241->369|TOLB_BORA1|3e-06|29.3|116/441| NREPEAT 1 REPEAT 2|341->389|392->438| SEG 54->71|atvfgggtvavaavvatv| SEG 114->129|gkltaagkyatggkgg| BL:PDB:NREP 1 BL:PDB:REP 179->381|1l0qA|1e-06|32.4|176/385| RP:PFM:NREP 1 RP:PFM:REP 174->423|PF10282|4e-08|32.1|237/311|Muc_lac_enz| HM:PFM:NREP 3 HM:PFM:REP 98->201|PF10282|3.4e-05|25.0|96/345|Muc_lac_enz| HM:PFM:REP 242->331|PF10282|4.2e-08|27.0|89/345|Muc_lac_enz| HM:PFM:REP 341->423|PF10282|6e-05|27.7|83/345|Muc_lac_enz| RP:SCP:NREP 1 RP:SCP:REP 152->424|1jmxB|2e-05|13.5|259/339|b.69.2.2| HM:SCP:REP 121->424|1fwxA2|1.2e-18|30.2|262/459|b.69.3.1|1/1|Nitrous oxide reductase, N-terminal domain| OP:NHOMO 18 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ----2--------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------1-11-----------3--------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------11--1--------------------------------------1------------------------------------------------------------------------------------1---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 219 STR:RPRED 49.8 SQ:SECSTR #################################################################################################################################################################EEEEEEEEETTEEEEEEEEEcccccEEEEEEcccEEEEEETTTEEEEEETTTTEEccEEEEEEEEccc#ccccTTcccccEEEEEEcTTccEEEEEETTTTEEEEEEEcTTcETTTTEEEEEEccccEEEEEEcTTccEEEEEETTTEEEEEETTTTEEEEEEEccEEEETccEEEEEEEccccEEEcEEEEETTTTEEEEEEEccEccEEEEEEcTTcc########################################################### DISOP:02AL 1-7, 35-48| PSIPRED cccccccccHHcccccEEEEEEccccEEEEEcccccccccHHHHHHHHHHHHHEEEEccccEEEEEEEEEEEEEEHHcccccccccccccEEEEEEccEEcccEEEEEEEcccccEEEccEEEEcccccccccccccccccccEEEEEEcccEEEEEcccccEEEEEEEEccccccccccccccccEEEEEEEccEEEEEEEccccEEccEEEEEEEEEEEEccccccccccccccccccccccEEEcccccEEEEEcccccEEEEEEEEcccccccccEEEEEcccccEEEEEcccccEEEEEcccccEEEEEEccccccccHHHHcccccccEEEEcccccEEEEEcccccEEEEEEEEccccEEEEEcccEEccccccccccEEEEEccccEEEEEEccccEEEEEEEcccccEEEEEEEccccHHHHccccccccc //