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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67756.1
DDBJ      :             putative IS605 family IS1136A-like transposase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  209/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
g.72.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   100->206 3ee7B PDBj 1e-26 16.3 %
:RPS:SCOP  302->353 1wj0A  g.72.1.1 * 2e-16 15.4 %
:RPS:PFM   7->45 PF12323 * HTH_14 2e-09 61.5 %
:RPS:PFM   74->282 PF01385 * Transposase_2 2e-47 50.0 %
:RPS:PFM   294->354 PF07282 * Transposase_35 3e-11 51.7 %
:HMM:PFM   72->280 PF01385 * Transposase_2 3.7e-53 30.1 206/227  
:HMM:PFM   294->361 PF07282 * Transposase_35 5e-26 42.4 66/69  
:HMM:PFM   6->48 PF12323 * HTH_14 2.4e-21 51.2 43/46  
:BLT:SWISS 1->393 YSNA_STRPR e-127 64.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67756.1 GT:GENE BAC67756.1 GT:PRODUCT putative IS605 family IS1136A-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 56620..57810 GB:FROM 56620 GB:TO 57810 GB:DIRECTION + GB:PRODUCT putative IS605 family IS1136A-like transposase GB:NOTE IS200/IS605 family (56610..57918). Inverted repeat sequence (12/15 bp). Target sequence (AT) GB:PROTEIN_ID BAC67756.1 LENGTH 396 SQ:AASEQ MATRVKRAFKYRFCPTDAQAAELSRTFGCVRKVYNLALAARTEAWARQERVTYNQTSAMLTVWKKTEELAFLSEVSSVPLQQALRHLQGAFANFFAKRAKYPRFKSKRKSRASAEYTSSAFTFRGGRLKLAKMAGPLDIVWSRPLPEGSVPTTVTVSRDAAGRWFVSMLCDDPTVKPLAATDAAVGIDVGLDHLLTLSTGEKIANPRHERRDRARLARAQRTCARKEKGSANREKARRKSARIHARITDRRRDGLHKLTTRLVRENQTLVIEDLTVRNMVKNHRLARAISDAAWSEFRSMLEYKAQWYGRDVVVVDRFFPSSKLCSHCGTLQGKMPLHVRTWTCDCQTVHDRDVNAAKNLLAAGLAVTVCGAGVRPQRRTPGGQSATKQKTPRREP GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 1->393|YSNA_STRPR|e-127|64.0|392/402| SEG 207->221|rherrdrarlaraqr| SEG 355->366|naaknllaagla| RP:PDB:NREP 1 RP:PDB:REP 100->206|3ee7B|1e-26|16.3|104/115| RP:PFM:NREP 3 RP:PFM:REP 7->45|PF12323|2e-09|61.5|39/46|HTH_14| RP:PFM:REP 74->282|PF01385|2e-47|50.0|204/207|Transposase_2| RP:PFM:REP 294->354|PF07282|3e-11|51.7|60/70|Transposase_35| HM:PFM:NREP 3 HM:PFM:REP 72->280|PF01385|3.7e-53|30.1|206/227|Transposase_2| HM:PFM:REP 294->361|PF07282|5e-26|42.4|66/69|Transposase_35| HM:PFM:REP 6->48|PF12323|2.4e-21|51.2|43/46|HTH_14| RP:SCP:NREP 1 RP:SCP:REP 302->353|1wj0A|2e-16|15.4|52/58|g.72.1.1| OP:NHOMO 1027 OP:NHOMOORG 231 OP:PATTERN ------1-7114--C--1------2--1423B-1---2----------215F3-----1---1----- ----1------------44-41----44444-2---2-76-29N------------------1---B3213----41----------1--------------------2---------------------------C-12----4-23Y4OI*EF11------21a2AL28-------------28-----1A-33333-5C36431351-----2345111-D3------4----------------1----16-2--19-H2--5513-2---------------------------------------------------23---------2-4--922-53M34--4--11211A----2-----1--7-----------------------------------------3-2--------------------------------111111112-----------------------------------------------B77-3B-------1-------1----1------------B1----------------------2-------------------------------------------3-2-51----------2-----2----31--------3------------2H-------------3--12221-1-33-22132113132-3111111-------D---1---1---1111121111233------------------------------1-------------64---------1J5----------------------------------------------------1-32----------2--5--1-------------------------------54-211-19-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 26.3 SQ:SECSTR ###################################################################################################ccEEEEEEEEccTTTcccEEEEEcccccEEEEEEEccccccEEEEEcTTc#ccEEEEEccccEEEEEccTTccE#EEEEEEcTTccHHHHHHHHHHHHcccc#cccc############################################################################################################################################################################################## DISOP:02AL 1-2, 222-234, 371-396| PSIPRED ccEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccEEEEccEEEEEEEEEEEEEEEEEEcccccEEEEEEEEEccccEEEEEEEEEccccccccccccEEEEEccccEEEEEEEccEEcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccHHHccHHHHHHHHHccHHHHHHHHHHHHHHHccEEEEEccccccccccccccccccccccccEEEEcccccEEccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc //