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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67776.1
DDBJ      :             putative regulatory protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  152/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1
:358 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   248->343 1d5yA PDBj 3e-07 34.8 %
:RPS:PDB   240->343 1bl0A PDBj 1e-17 28.0 %
:RPS:SCOP  234->343 1v4aA1  a.24.16.4 * 2e-14 12.3 %
:HMM:SCOP  292->344 1d5yA2 a.4.1.8 * 1.1e-10 44.0 %
:HMM:PFM   310->343 PF00165 * HTH_AraC 7.7e-10 48.5 33/42  
:BLT:SWISS 77->343 FEAR_ECOLI 6e-17 28.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67776.1 GT:GENE BAC67776.1 GT:PRODUCT putative regulatory protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 75600..76676 GB:FROM 75600 GB:TO 76676 GB:DIRECTION + GB:PRODUCT putative regulatory protein GB:NOTE PF00165: Bacterial regulatory helix-turn-helix proteins, araC family GB:PROTEIN_ID BAC67776.1 LENGTH 358 SQ:AASEQ MHDHAGGAEAVPRCVSAGGCQDGWDHRVMTLCSRDVPAAERFSWFCELVARDMAPHDIVTEHVQDFSASATLLSLGEGIGVSSVAFPAMQSIRSRRLIRRSDPELWVLALVVKGAMQREQGRNQVNPRPGDLVLYDSSQPYWASIATDDVAQSIVLHLPRRTVPVPEQALRRMVATALPSRTGIGALLSQLLGGLVEQGPKLEAGQTGRVASAVVDLTTAFLAGLSGADGPQTTAARRVAQLHQIKSFIRSRLGEPGLTPTAVAAAHHISLRALQYLFREDGRTVGAFIREQRLERCRAGLADPRLAGHSVAAIAVRAGFCDAAAFSRAFKARYGMPPGEYRRHCGGPPSQGRAGHTG GT:EXON 1|1-358:0| BL:SWS:NREP 1 BL:SWS:REP 77->343|FEAR_ECOLI|6e-17|28.9|253/301| SEG 91->101|sirsrrlirrs| BL:PDB:NREP 1 BL:PDB:REP 248->343|1d5yA|3e-07|34.8|92/288| RP:PDB:NREP 1 RP:PDB:REP 240->343|1bl0A|1e-17|28.0|100/116| HM:PFM:NREP 1 HM:PFM:REP 310->343|PF00165|7.7e-10|48.5|33/42|HTH_AraC| RP:SCP:NREP 1 RP:SCP:REP 234->343|1v4aA1|2e-14|12.3|106/151|a.24.16.4| HM:SCP:REP 292->344|1d5yA2|1.1e-10|44.0|50/0|a.4.1.8|1/1|Homeodomain-like| OP:NHOMO 290 OP:NHOMOORG 153 OP:PATTERN -------------------------------------------------------------------- -----1-1112-------------1-----------5395---1--1-----3321--------11-221---------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------213561--2-12-11211123223-21-11135--1-4332111-1323112---21----1-1-----------1-----------------------------------13--1----334453-222111-33333137-31-11--11--52--31--3111--1-1-------------1------------------------------1----------------------------------------------------------1--------------------1---1---11--111---1-1---111111111---------------------1----------------------------------1---1---------------11111-------223222-4-2331-1-2------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 115 STR:RPRED 32.1 SQ:SECSTR ######################################################################################################################################################################################################################################HTTccHHHHHHHHHHHHHHHTTTTccccccHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTTc############# DISOP:02AL 1-6, 224-240, 342-358| PSIPRED ccccccccHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccccEEEEEEcccEEEEEcHHHHccccccEEEEEEEEccEEEEEEccEEEEEcccEEEEEcccccEEEEEcccccEEEEEEEEcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHcccccccccccc //