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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67784.1
DDBJ      :             putative endoribonuclease L-PSP
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  221/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
d.79.1
:129 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->125 2dyyG PDBj 3e-12 31.9 %
:RPS:PDB   6->127 2dyyG PDBj 6e-24 30.3 %
:RPS:SCOP  11->128 1pf5A  d.79.1.1 * 7e-22 32.7 %
:HMM:SCOP  1->128 1qd9A_ d.79.1.1 * 6.4e-32 41.1 %
:RPS:PFM   6->127 PF01042 * Ribonuc_L-PSP 7e-11 41.9 %
:HMM:PFM   13->126 PF01042 * Ribonuc_L-PSP 5e-32 37.5 112/121  
:BLT:SWISS 7->126 DFRA_MYXXA 8e-15 38.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67784.1 GT:GENE BAC67784.1 GT:PRODUCT putative endoribonuclease L-PSP GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 85042..85431 GB:FROM 85042 GB:TO 85431 GB:DIRECTION + GB:PRODUCT putative endoribonuclease L-PSP GB:NOTE PF01042: Endoribonuclease L-PSP GB:PROTEIN_ID BAC67784.1 LENGTH 129 SQ:AASEQ MLTHIPPDGVAPGNGYSHVVVGEGRLVVISGQVALDEKGNVVGKGDAAAQARQVFENLRRCLAAGGATFAEIAKFTFYVTDVAILPEVRAVRDAHIDTARPPASTAVQVAALYRPELMLEVEALAIIPW GT:EXON 1|1-129:0| BL:SWS:NREP 1 BL:SWS:REP 7->126|DFRA_MYXXA|8e-15|38.3|115/131| BL:PDB:NREP 1 BL:PDB:REP 1->125|2dyyG|3e-12|31.9|119/125| RP:PDB:NREP 1 RP:PDB:REP 6->127|2dyyG|6e-24|30.3|119/125| RP:PFM:NREP 1 RP:PFM:REP 6->127|PF01042|7e-11|41.9|117/119|Ribonuc_L-PSP| HM:PFM:NREP 1 HM:PFM:REP 13->126|PF01042|5e-32|37.5|112/121|Ribonuc_L-PSP| RP:SCP:NREP 1 RP:SCP:REP 11->128|1pf5A|7e-22|32.7|113/130|d.79.1.1| HM:SCP:REP 1->128|1qd9A_|6.4e-32|41.1|124/0|d.79.1.1|1/1|YjgF-like| OP:NHOMO 323 OP:NHOMOORG 238 OP:PATTERN ------------------1--------11-----------------1-----1-1111--1------- --2-1---111---111----1---2-----1-222--------11-----11-------23--2122321-----------2-----22-1-1------1-----1--1--------------------------1--11---1-2-1111-1111111-111111221111--11111---222--1-----22222112-22212211--11222--1----------1--------------------------------------------------------------------------------------------------------------------1-------1------------------------------2-----11112----------3-111--1-1-31-1----1---2111---11-1------1----------------------------------------------1-5---43212114232----2123------522223---111--1--212-21-------1---11111------------------------1-------1-321-------------------------1------1-1-------------------------11----------1--1-------------------------------112------1-11111111111111----------111111111111----------------11---------------------1--111111111-1-2121----------------------------11----------------------------------------------------------------1------ ------------11--1------------------------------------1--------------------------------------1-----------------------------------------------------------------1-----------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 99.2 SQ:SECSTR ccEEEcTTccccccccccEEEEETTEEEEEEEccccTTTcccccccHHHHHHHHHHHHHHHHHHTTccGGGEEEEEEEEcccccHHHHHHHHHHHHTHTTccEEEEEEccccGGGGccEEEEEEEEcc# DISOP:02AL 129-130| PSIPRED ccccccccccccccccccEEEEEccEEEEEcEEEEcccccEEccccHHHHHHHHHHHHHHHHHHccccHHHEEEEEEEEccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccEEEEEEEEEEcc //